Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1092 ATGAGGAAGCATGGATGGCAGCTCCCCTACCATCCTCTCCAGGTGGTGGCTGTTGCTGTATTTCTGGCATTGGGATTTGCCTTCTATGTGTTCTTTGCCCCTTTTGTTGGCAAGAAGATGTCTCAGTATGTTGTGATGGGGGTCTACACTCCTCTTATTATATGCGTCTTTAGCCTATATGTTTGGTGTGCGGCTGCCGATCCTGCAGACTCAGGAGTCTTCAAGTCCAAAAAATATCTAAAGATTCCAGACAATGGAAAACATAACCGACCCAAGGAATCTAAACTAGGTGGGGAATCAACTTCATCAATAAATGATGCCAATGCTGCAACAACTGGACAGAAGCCTGTGGATGAGGATGTGCTGGGTATGAATGCAACTACAGGCAATATCACTTCTGAGACTGAAAGAAAGAATGCACCATCCAATCATTCGTCTTGTTTCACGGGTTTATTGGTATTCATTCCTTGTGCTTTCTTATGCAACTGCTCAAGTTCACAAGAAGAATCTTCCGAGCAACAAATGAGCGAAGATGGCATGTTCTATTGCAGTTTGTGTGAAGTGGAGGTTTTCAAGTACAGCAAGCATTGTAGAGTTTGTGACAAATGTGTGGATCATTTTGATCATCACTGCAGGTGGCTCAACAACTGTATAGGGAAAAAGAACTATAGACAATTTTTTGCACTCATGGTTTCTGCCCTTCTCTTGCTTGTTCTTCAATGGTTGACTGGAATCCTTGTACTGATCTGCTGTTTTCTTGAGCGGAAGAGATTCTCTGTGGATATCACCTCCAAGTTGGGCAGCAGCTTCTCCTTGGTGCCGTTTGTTATTGTGGTGGCAGTGTGCACCATTTTGGCTATGATTGCAACCCTACCACTTGCTCAGCTATTCTTCTTTCACATTCTCCTCATAAAAAAGGGAATTAGCACATATGATTACATCATAGCTCTAAGAGAGCAGGAGCAACAAGGAGTTGGAGGTCAGCAGAGTCCCCAAATGTCTCCTGCAAGCTCACTTACTGGGTTAAGCAGTGCTAGCTCCTTTACAACTTTCCACCGAGGTGCGTGGTGTACACCTCCACGCTTGTTTCTTGAAGATCAGTTTGATGTGGTTCCTCCAGACACTGGATCAGTTAGTTCATTAGGGAAAAAGGTGGTGGGAGATGAACCAATCAAGAAAAAGAACCCTGGTGCAGTAAAGATTAGTCCATGGACATTAGCTCGTCTAAATGCAGAAGAAGTTTCAAAGGTTGCTGCAGAAGCAAGAAAAAAGTCAAGGATTCTGCAGCCTGTTGCAAGACGGGAAGCACCATTTGGACTAGAAACTGACAGCAGCTTTGGCAGTAGTGGCCGCAGGATGGTGCCAAGGCCTGAGAACAATAGAAGAAGAACTAATAAGCGGGTACGTCTCCCAGTGGAACTACCCCTTGAACCCCTGACAAAGGTTTCAGCAAGAACTGTTGATAACAATAAAAATGATGTGATCACTGAGACATCCACAAGTTTAGCTCCTCTTCAGCTGGAAGCACGGAGTGCTTTCCGAACAAGCCGTGCCATGTCAAGCACTGGTGGGATTGTTGCTTCTTCTCCTGAGAGCAGTTTAGACTCACCTGATCTCCATCCATTTCGGGTCTCATCATCAGGAGCTGAAGAAGCAAGGCGGCTCACAGGTCTATCTGCTGCTGGTGCAGCTGCTCAGAAGGGAATCCCATTGTCTAGGTCAACAAGTGATGGGTATGAAGCATCTGGTGGGGAAGACAGTGATCGAGTTCCTTCCAGGACCGTTCATAGGTTGACAAACTGGAGTAACTTTCTTTTTAACTCTGATCCAGTTGAGAGGGTTGGAACATTGAATGCCTCGGCATCATCAAGTCAGGCTAACATGATGAGAAAGCTTTGA 1899 0.4534 MRKHGWQLPYHPLQVVAVAVFLALGFAFYVFFAPFVGKKMSQYVVMGVYTPLIICVFSLYVWCAAADPADSGVFKSKKYLKIPDNGKHNRPKESKLGGESTSSINDANAATTGQKPVDEDVLGMNATTGNITSETERKNAPSNHSSCFTGLLVFIPCAFLCNCSSSQEESSEQQMSEDGMFYCSLCEVEVFKYSKHCRVCDKCVDHFDHHCRWLNNCIGKKNYRQFFALMVSALLLLVLQWLTGILVLICCFLERKRFSVDITSKLGSSFSLVPFVIVVAVCTILAMIATLPLAQLFFFHILLIKKGISTYDYIIALREQEQQGVGGQQSPQMSPASSLTGLSSASSFTTFHRGAWCTPPRLFLEDQFDVVPPDTGSVSSLGKKVVGDEPIKKKNPGAVKISPWTLARLNAEEVSKVAAEARKKSRILQPVARREAPFGLETDSSFGSSGRRMVPRPENNRRRTNKRVRLPVELPLEPLTKVSARTVDNNKNDVITETSTSLAPLQLEARSAFRTSRAMSSTGGIVASSPESSLDSPDLHPFRVSSSGAEEARRLTGLSAAGAAAQKGIPLSRSTSDGYEASGGEDSDRVPSRTVHRLTNWSNFLFNSDPVERVGTLNASASSSQANMMRKL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1092 632 MobiDBLite consensus disorder prediction 440 464 - -
Vvi1g1092 632 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 20 354 - -
Vvi1g1092 632 Pfam DHHC palmitoyltransferase 181 314 IPR001594 GO:0016409
Vvi1g1092 632 MobiDBLite consensus disorder prediction 96 112 - -
Vvi1g1092 632 MobiDBLite consensus disorder prediction 85 113 - -
Vvi1g1092 632 ProSiteProfiles DHHC domain profile. 181 231 - -
Vvi1g1092 632 MobiDBLite consensus disorder prediction 522 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1092 Vvi-Chr1 13673095 13679035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1092 169 224 Lipid Metabolism Gene Families AT4G22750 41.071 4.41e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1092 K20027 - vvi:100264317 1196.42