Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1089 ATGACGGTAGTTGTTTTGTTGTTCATGATGAGGGAAAGACAAGAAAAAACAACCAAAGCAAGAGGTGTTGCAGATGATGGAATTAACAATCGGCCATTGATAATAGCTGGGAATGTGCTTGTTGATAATCTCAAACAGGCGATAGACTTTGATGTTGTGGTTAAGGCTACTCTAAGGGATTCAAATAAGCTTAATAGTGGGACTTTTAGCACTGTCTACAAGGCAGTTATGCCTTCTAGGCTGATTATATCAATGAAGAGTCTAAGATCAATGGATCGAACCATCATTCATCACCAGAACAAGATGATTAGAGAGATTGAAAGGCTTAGTAAACTGTCATGA 342 0.383 MTVVVLLFMMRERQEKTTKARGVADDGINNRPLIIAGNVLVDNLKQAIDFDVVVKATLRDSNKLNSGTFSTVYKAVMPSRLIISMKSLRSMDRTIIHHQNKMIREIERLSKLS* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1089 113 Gene3D Phosphorylase Kinase; domain 1 45 113 - -
Vvi1g1089 113 SUPERFAMILY Protein kinase-like (PK-like) 59 113 IPR011009 -
Vvi1g1089 113 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 28 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1089 Vvi-Chr1 13619159 13619500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1089 6 112 Receptor kinase-like Gene Family AT2G41820 65.741 1.53e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1089 - - vvi:100258928 191.815