Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1085 ATGAATATTTCAAATCATCCATCAGATGGTGCCACACCGTTTTCGGTCAAGACTTCAAATGATCCACTCCGAAAGATTGTATCCTCTTTTAAAGTCCAATCTGAAAGCATTCAATCAATAAAAAGAATGAATGGATCCATCCCTGCTGCGACGCTACGTAATGTAAAGTCAAACCTGAGTAGAGAGCAGAAGAGGTCACCATTTCGCCAACACTATCTGCAAATGGGAAATCAACGGAAGCCAAACTGTTTGCTTATGGAGGTTTGCAAGATTATTGAAGGTCAAAGATATTCCAAGAGGTTGAATGAGAGGCAAATTATTGCTTTACCGAAAGGTTACTTGTTAAGTTCCTCATACATTTCCATGCATGGCGAGACTATGACACCATGGAAATACACAGCAAAGGGCAAGAATCTTTTCTTACGACATGAAGACCAGAGGAATTTCGGTCTTGAGCAGCTTGCAGACCGCAATCTCATTTCATTCTATGAGAGGTCAAATATCCCAGATGGCGCGCATGGCTACCCTGTTATTAATTTAGCATTTGCGCTGAGTCTCCTTTGTTTCATAGTCATGCATGTGTCTTTCCTGTCTAGCAACACCACATCAATAGAGGTTTATGACAAGAGGAGAGCTGTCAGGTGGAAGTATGACTTAGGCCGCAAGACGAATTTTGAGCAGGTCTTTGGCAAGAAAAAGGCATTGTGGTTGTTCCCATTGTACTCAGAAGATGATTTCAGCAGCATTCCTGCACTCAATGGACTTAAGTCTTGCAGCCGCGCCATCCATTAA 792 0.423 MNISNHPSDGATPFSVKTSNDPLRKIVSSFKVQSESIQSIKRMNGSIPAATLRNVKSNLSREQKRSPFRQHYLQMGNQRKPNCLLMEVCKIIEGQRYSKRLNERQIIALPKGYLLSSSYISMHGETMTPWKYTAKGKNLFLRHEDQRNFGLEQLADRNLISFYERSNIPDGAHGYPVINLAFALSLLCFIVMHVSFLSSNTTSIEVYDKRRAVRWKYDLGRKTNFEQVFGKKKALWLFPLYSEDDFSSIPALNGLKSCSRAIH* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1085 263 SUPERFAMILY PAZ domain 70 107 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1085 Vvi-Chr1 12671746 12673697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1085 177 261 Lipid Metabolism Gene Families AT4G22750 55.294 2.16e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1085 K20028 - vvi:100257546 156.377