Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1082 ATGGAGGGTCCAGAAGGCTTCAACGACTGGGAGCAAATCCAATCCCCAGGTTCCCAGATTCCTCCTCCCACGGCCCAGTCAAGACATTGGGCGATGACAGTGATAAAGGATGACTTTTACAAAGACCGTTCCGTGTTTCCTCCCGGTGACCATGAAGGCCTGCGAATTTCTTCACAAGATACTCCACAGCCGGATTCACTGTCACCATCGTTGTCACCGCGGTCGCAACTGCTGCATGGGCAAGGATTTGGGGGGCGTTTGAGGTCGCGTTTTGGGGTGCTGAGTTCCGGGATTGTAAAGATTGCCTCCAGTGTTCGATGTTATGCAGTGGGTGCTGGAGGATTTCGGGCATTTGGGTCAGCAGCTGGGGGGGCGGCCGCGGCGCTGTTGCTGTTGCTGTCGTTGTTGTACTTGTGGGTTCGGCGGTGGCATCGGCTGCGGGAAGAGGAGAAGAATCGTTTGGTCCTCTTGCTCAAAGAGAAAGACCAGAAGATCAGTCAGCTCTTACTTCAAATTGCCAAAATGAGTGAAATGTTTTCAGCACACCGCAGGGTTCCTGTGGTCCGAGTTGGTGGAATGATCACACATGGTCAGCCAACCTGA 603 0.5373 MEGPEGFNDWEQIQSPGSQIPPPTAQSRHWAMTVIKDDFYKDRSVFPPGDHEGLRISSQDTPQPDSLSPSLSPRSQLLHGQGFGGRLRSRFGVLSSGIVKIASSVRCYAVGAGGFRAFGSAAGGAAAALLLLLSLLYLWVRRWHRLREEEKNRLVLLLKEKDQKISQLLLQIAKMSEMFSAHRRVPVVRVGGMITHGQPT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1082 200 PANTHER TRANSMEMBRANE PROTEIN 2 190 - -
Vvi1g1082 200 MobiDBLite consensus disorder prediction 42 73 - -
Vvi1g1082 200 Coils Coil 158 178 - -
Vvi1g1082 200 MobiDBLite consensus disorder prediction 1 27 - -
Vvi1g1082 200 MobiDBLite consensus disorder prediction 11 26 - -
Vvi1g1082 200 MobiDBLite consensus disorder prediction 56 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1082 Vvi-Chr1 12601185 12602209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1082 - - vvi:100241338 321.627