Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1081 ATGGAAGCGGCCTCTTCAGTCTCTGATTTAGGGATTCTGGACTCTGTTGACGATGCCTCCATCACAGAAATTATGGAGAGCTGGGACGGTTTCTGTAGAGCCACTGAAGCTCTCCTCAACGGACACGGCGATCTCTCCGTCGGATCCGAATTCGTTTCTCACGTTCACTCTCTCTGTAAGCGCTCGCTCGGCTCTCTCGTTCAAGACCACTTTCTTCGCTCCCTGGAGGAAACTTTTGAGAGAAATGGTGCTACGAGGTTCTGGCGGCATTTTGATGCTTACACCCACGTTGAAGTTATGGAAATGAGTAAATCCCCTATTCAAGAGAATGGGATTCAGAAAGTATTATATAAAGCATTGGATGATGTGTCTTTGGAAAAACAGTATCAGGAAAAGTGCCTGTTAATGCTGGTTCATGCTTTACAGTCATACAAGGATAGTATATCAGAGGAAAGACACAACTCAGATGCAGAAAGAATCCATCTTTTTTCTAAATATCAGTTAATAGTGTCTTCAGTTCTCATGACCACGCTTCCTCGGCATTTCCCTGAGATACTCCACTGTTATTTTAAGGGAAGGTTGGAGGAGTTAAGTACAATTATGGCTGGAGAATATGAAGATGATAATGAATCTGACGACAAAGATGACATGGATTTAGATGAGAAAAATAAAGTCTCCTATAGAGGTGAAATGGATATCGATGAATGCTATCAGCGGAGAAAGTTTTTAGAGAATAACAAATTGGTGAAAAACATAGGAAAGGTGGTTCGTGATCTTAGAAATCTTGGATTTACATCCATGGCTGAAGATGCCTACGCTTCTGCTATTTTCTTGCTCTTGAAGGACAAAGTTCATAATTTGGCTGGGGATGATTACAGGAGTTCTGTTTTGGAATCTATTAAAGAGTGGATACAGGCTGTGCCTCTTCAATTCTTGTATGCACTTCTTGCTTATCTGGGTGACTCTGTTAGTTATGATAATCCTTCATCTGGTCTCAAATCACCTTTGGCTTCACATCCCTCTTCATGTTATCCTGGAATTGACACCCCCTCTGAAGGACTGATCAGATGGCAGTTGCGGCTGGAGTATTTTGCTTACGAAACATTACAAGATTTAAGAATAGCCAAACTTTTTGAGATTATTGTGGATTACCCTGACAGTTCTCCTGCTATTGAAGACTTAAAACAGTGTCTTGAATACACTGGACAACATTCCAAGTTGGTTGATTCATTTATATCTGCATTACGATATCGCTTGCTCACTGCTGGTGCCTCAACCAATGATATATTACACCAATATGTTTCAACTATTAAAGCACTGAGGACCATAGACCCAGCAGGTGTTTTTCTTGAAGCAGTGGGTGAACCAATAAGGGACTATCTAAGGGGAAGAAAAGATACCATAAAATGCATTGTGACCATGCTTACAGATGGGACTGGTGGGAATCCAAATGGACCTGGAAATACTGGTGATAGCCTTCTTGAAGAATTAAATAGAGATGAAGAAAATCAAGAGAATGCTGGTATTGATGATGACTTCAACATTGATGAAAAGCAAGACTGGATCAATGCAGAACGCTGGGAGCCTGACCCAGTAGAGGCTGACCCATCGAAGGGTAGCAGGAACCGGAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCGAAGGATCAGCTAGTTAATGAATATCGTGTTATGCTGGCTGAAAAGCTTTTGAACAAATCTGATTATGACATTGACTCAGAGATACGTACTTTAGAACTCCTAAAGATACATTTTGGGGAGAGCAGCATGCAGAGGTGTGAGATTATGCTCAATGATTTGATTGATTCCAAAAGGACAAACTCCAATATAAAAGCAACCATAACTCAGCCATCCCAAATAGGTTCTGAGCTAGGAGAAACTGGGGTGTCTCTGGATATTCTGGATGCTACAATCATATCATCAAATTTCTGGCCGCCAATCCAGGATGAGGCTCTTAACATACCTGGGCCTGTGGACCAGCTGCTTGCTGATTATGCGAAAAGGTTTCACAAAATCAAAACTCCTCGAAAGCTACTATGGAAGAAAAATCTTGGTACAGTCAAGCTGGAGTTGCAATTTGAGGGTAGAGTGGTGCAGTTCACAGTGGCTCCTTTGCATGCAGCAATTATAATGCAATTCCAAGATCAAACAAGTTGGACCTCTAAGAATCTTGCAGCTTCTATTGGGGTACCTGTGGATGTACTTAATCGTAGGATAAATTTCTGGATAAGCAAGGGAATTCTCTCGGAATCACTGGTAACAGATCCTAATGACCACATATTTACCCTAGTGGATGATATGGTTGAGCCCGGTAAGAATAGTGTTAATGCTGGGAGCTGTGAGGAGCTTCTTGTATGTGATGAGGAAGGGGAGAGATCTGTAGCCTCTGTTGAGGATCAATTGCATAAAGAAATGATTGTGTATGAGAAATTTATCATGGGGATGCTCACAAATTTTGGCAGCATGGCATTGGATCGGATTCATAATACTCTTAAGATGTTTTGTTTAGCTGATCCTCCTTACGACAAATCACTGCAACAACTGCAAAGCTTCTTATCTGGTCTTGTTTCAGAAGAGAAATTAGAAATAAGAGATGGAATGTACTTTCTAAAGAAATAG 2652 0.4121 MEAASSVSDLGILDSVDDASITEIMESWDGFCRATEALLNGHGDLSVGSEFVSHVHSLCKRSLGSLVQDHFLRSLEETFERNGATRFWRHFDAYTHVEVMEMSKSPIQENGIQKVLYKALDDVSLEKQYQEKCLLMLVHALQSYKDSISEERHNSDAERIHLFSKYQLIVSSVLMTTLPRHFPEILHCYFKGRLEELSTIMAGEYEDDNESDDKDDMDLDEKNKVSYRGEMDIDECYQRRKFLENNKLVKNIGKVVRDLRNLGFTSMAEDAYASAIFLLLKDKVHNLAGDDYRSSVLESIKEWIQAVPLQFLYALLAYLGDSVSYDNPSSGLKSPLASHPSSCYPGIDTPSEGLIRWQLRLEYFAYETLQDLRIAKLFEIIVDYPDSSPAIEDLKQCLEYTGQHSKLVDSFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTGGNPNGPGNTGDSLLEELNRDEENQENAGIDDDFNIDEKQDWINAERWEPDPVEADPSKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSKRTNSNIKATITQPSQIGSELGETGVSLDILDATIISSNFWPPIQDEALNIPGPVDQLLADYAKRFHKIKTPRKLLWKKNLGTVKLELQFEGRVVQFTVAPLHAAIIMQFQDQTSWTSKNLAASIGVPVDVLNRRINFWISKGILSESLVTDPNDHIFTLVDDMVEPGKNSVNAGSCEELLVCDEEGERSVASVEDQLHKEMIVYEKFIMGMLTNFGSMALDRIHNTLKMFCLADPPYDKSLQQLQSFLSGLVSEEKLEIRDGMYFLKK* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1081 883 Pfam Cullin family 549 752 IPR001373 GO:0006511|GO:0031625
Vvi1g1081 883 SUPERFAMILY "Winged helix" DNA-binding domain 812 882 IPR036390 -
Vvi1g1081 883 Gene3D Cullin Repeats 510 627 - -
Vvi1g1081 883 Pfam Anaphase promoting complex (APC) subunit 2 822 879 IPR014786 -
Vvi1g1081 883 Gene3D Cullin; Chain C, Domain 2 644 784 - -
Vvi1g1081 883 SMART APC2_2 822 881 IPR014786 -
Vvi1g1081 883 SUPERFAMILY Cullin homology domain 525 776 IPR036317 -
Vvi1g1081 883 Gene3D - 798 883 IPR036388 -
Vvi1g1081 883 FunFam Anaphase-promoting complex subunit 2 644 788 - -
Vvi1g1081 883 ProSiteProfiles Cullin family profile. 551 754 IPR016158 -
Vvi1g1081 883 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 23 882 IPR044554 -
Vvi1g1081 883 FunFam Anaphase-promoting complex subunit 2 798 883 - -
Vvi1g1081 883 SMART cul_2 547 704 IPR016158 -
Vvi1g1081 883 FunFam Anaphase-promoting complex subunit 2 515 628 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1081 K03349 - vvi:100263601 1710.27