Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1077 ATGGTTGTTCTAGTGGTTCAATTATTATGTTGGACGGGACAGTTTATTGGCCATGGGATCTTTGAGAAACGAGCACCGGCTCTTTTGGACAACCTCGCTCAAGCATTTTTAATGGCTCCCTTCTTTGTACTTCTGGAGGCTCTTCAGGCCTCAGGTTATGAGCCTTACCCAGGATTTCATGCAAGAGTGCAAGCAAAGATAGAAGCTGAAATCAATGAATGGCAAGACAAAAGGCAGACATTGATTTCCTAG 252 0.4405 MVVLVVQLLCWTGQFIGHGIFEKRAPALLDNLAQAFLMAPFFVLLEALQASGYEPYPGFHARVQAKIEAEINEWQDKRQTLIS* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1077 83 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 2 49 IPR009305 -
Vvi1g1077 83 PANTHER DUF962 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_8G05310) 2 80 IPR009305 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1077 Vvi-Chr1 12436843 12437317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1077 - - vvi:100248185 168.318