Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1049 ATGGCCACCAAACAATTTTTTATCCTCAAAAGCCATCTCGGTTTTGATAAAAGCCTTTTCTATCAGTTTGTGTGCAGAACCATGTTCAGCTTCGCTGGTTCTTTCTGGGTTTTGGTCTGCACTTGCACGTGTTGTGTTTTTGGATCCATAATCAGATATTTGTTCAGATTTCGAGTTGAGGACAGTTCGAGAAAGATGGATTTGCTCCGAGAAAGGCAGATTGGTTCGGATTGCTTTGAGAATTCGGAAGCTGATGAGAACAACGGAGAAAGAGAGGGTCCTGTTATTACGGAAACTGCGTCCACTGCCAATACGAGTAAGTATCAGTTCATATGTGGGAAAGATTTCAGGGGCTTCATTGAAGAACCACAGACTATGAGCTTTACTGTCCAAGAATTTTATGCGGCCTCAAATGATGGCTCTATCAGCAATAGCCCAGATCCTAATACTGAAAAAGATATTCGGAAGGTTGATTTGGAAGTGGAGGATGTTAATCATGTAAAAGGAGAAGATTCTGCTGAAAATTTTGGTTGTGAGCTTAATTTAGAGGCAGAGGATATAGATCATGCAAAAGCAGAGGATTCTGCTGAGTGTTTTGGCGGTGGAATTAATTTAGAAGCAGAGGATGTCGATCATTCAAAAGCAGAGGATTCTGCTGAGTGTTTTGGCGGTGGAATTCATTTAGAAGCAGAGAATGTCGATCATTCAAAAGCAGAGGATTCTGCTGAGTGTTTTGGCGGTGGAATTCATTTAGAAGCAGAGAATGTCGATCATTCAAAAGCAGAGGATTCTGCTGAGTGTTTTGGCGGTGGAATTGATTTAGAAGCAGAGGATGTCGATCATTCAAAAGCAGAGGACTCTACTGAATGTATTGGTACTCAGCTCAATCTAGAAGAAGACGATGTTGATCATGCAAAAACAGAGGACTCTGCTGGAAGCTTTAGAGATGAAGAGGCTTTAGAGGAACAAGAACAAGAAGTATTTACACAAGATGAACTTTCCGAGAGGGGATGGACTGGTGGCTCAGAAAATACTTTTCTGGGTAATTGTCATTCCTCCAATGAGGTTTCTGAAAATTACCCTTTTCCTTTAGGTTCAAACCACGATTTGGTTGATTCAGGTGATGGGTTCATAATTCTGGACGATGTGTTTAATTCAGTTAATGATGACCCTTTGTTGGTTGGAGATGTCGGTGAATGGCTGGAGAAATCAACGCTTTTACCAATTGTCACGGAGAAGGCAGGAGTTGTTGATAACGATCCAAGTATGGAAGAAAATCCTTCACATGATACAAATTTTTTGGATCAGGAAGCAGATGTCAAAGATATTGAAGATGAATACTTAGAACTAGAATCTCAATTGCAAAGCTCCAATGACAAAGAACTTTTCTCTGAGAACGATTCCAGAAAAGTCGAGGACAGATATGAAGAGGACATAGACTTGGAAGGGACAAATAAAGTGAATAGTTTAGAAAAATCAGACGAACCCTCCTTGCAGAAGAGTCCATCTTCCTCAGATTCTGACGATGATAGCCTATGGGAGAACTTGTGGGAGCATGGAAATTTGATAGAACAGCTGAAATTGGAATTGAAAAATGTGAGAACCAGGGGGCTTCCCACTATATTAGAAGAATCCGAGTCTCCCAAGATTGTTGATGATCTAAAGCCATTGAAGATTGAAGAAAAATTGGAGCACAAAGATCGAATGGAAGGGATTCAGAAATTCTACCAGCGGTATGCAGATAAAATGCGAAAACTGGATATCCTGAATTACCAAACTGTGCATGCAATCAGTTTCCTCCAGTTGAAGGACCCAGTCCAATTAAATTCAAACAAAACACCTTCAGCTTCAGCACTTAAATCTCTGCTCTCACAGAAGACAGCAAAGCTGAGAAGGCTCCAAGATGGCCCAACCCTGAATTTGATTAGAGAATTGAAAAATGATTTGGAAATGATATATGTGGGACAGCTGTGCCTTTCCTGGGAAATGCTCCAGTGGCAATATGGGAAAGCCCTAGAGCTGCAGGAATATGATCCTGATGGTTTTCGCCAATACAGTGAAGTTACCAGTGAATTTCAACAGTTTCAAGTACTTGTGCAAAGATTTATAGAAAATGAGCCATTTCAAGGACCCAGGGTACAGTGCTACGTTAAGAACAGATACCTTATCCATAAGCTTCTTCAAGTTCCAGCAATTAAAGATGATTGCATCAAGGATAAGAAGGAAATGATAGAGACAGGGCAAGATGCAATTACAATTGCAATGCTAACAGAAGCCATTGAGAAATCTATGCACGTTTTCTGGGATTTTCTTCATGCCGACAAACACGTAAAGGGTCTTCAAGGAAACCAGGTTGATCTCCAAAGTCCTGCAGATGTAGAGCTCCTGATGGATATTCAAACGGGTCTTCATAAGAAGGAGAAAAAGCTGAAAGAGCTTTTGAGAAGCAAAAATTGCATAGTGAAGAGGCTTCAAAAGCATAGAGAAGATAGATTAGACCGCTCGCTCTTCTTTGCTAAGGTTGAGTTGAGACTGATTTCGAGAGCGCTTAACATGTCGAGATTGACAACAGATCAACTAGCATGGTGCCAAAAGAAACTAAGCCAAATCAACATTGTTAACCGAAAAATTCATGTAGAACCCTCATTTATGCTCTTCCCGTGA 2664 0.4069 MATKQFFILKSHLGFDKSLFYQFVCRTMFSFAGSFWVLVCTCTCCVFGSIIRYLFRFRVEDSSRKMDLLRERQIGSDCFENSEADENNGEREGPVITETASTANTSKYQFICGKDFRGFIEEPQTMSFTVQEFYAASNDGSISNSPDPNTEKDIRKVDLEVEDVNHVKGEDSAENFGCELNLEAEDIDHAKAEDSAECFGGGINLEAEDVDHSKAEDSAECFGGGIHLEAENVDHSKAEDSAECFGGGIHLEAENVDHSKAEDSAECFGGGIDLEAEDVDHSKAEDSTECIGTQLNLEEDDVDHAKTEDSAGSFRDEEALEEQEQEVFTQDELSERGWTGGSENTFLGNCHSSNEVSENYPFPLGSNHDLVDSGDGFIILDDVFNSVNDDPLLVGDVGEWLEKSTLLPIVTEKAGVVDNDPSMEENPSHDTNFLDQEADVKDIEDEYLELESQLQSSNDKELFSENDSRKVEDRYEEDIDLEGTNKVNSLEKSDEPSLQKSPSSSDSDDDSLWENLWEHGNLIEQLKLELKNVRTRGLPTILEESESPKIVDDLKPLKIEEKLEHKDRMEGIQKFYQRYADKMRKLDILNYQTVHAISFLQLKDPVQLNSNKTPSASALKSLLSQKTAKLRRLQDGPTLNLIRELKNDLEMIYVGQLCLSWEMLQWQYGKALELQEYDPDGFRQYSEVTSEFQQFQVLVQRFIENEPFQGPRVQCYVKNRYLIHKLLQVPAIKDDCIKDKKEMIETGQDAITIAMLTEAIEKSMHVFWDFLHADKHVKGLQGNQVDLQSPADVELLMDIQTGLHKKEKKLKELLRSKNCIVKRLQKHREDRLDRSLFFAKVELRLISRALNMSRLTTDQLAWCQKKLSQINIVNRKIHVEPSFMLFP* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1049 887 Pfam Protein of unknown function (DUF1666) 647 887 IPR012870 -
Vvi1g1049 887 MobiDBLite consensus disorder prediction 490 510 - -
Vvi1g1049 887 MobiDBLite consensus disorder prediction 454 512 - -
Vvi1g1049 887 PANTHER OS09G0413600 PROTEIN 21 887 - -
Vvi1g1049 887 Coils Coil 433 460 - -
Vvi1g1049 887 MobiDBLite consensus disorder prediction 462 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1049 Vvi-Chr1 11986924 11990597 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1049 - - vvi:100263683 1743.78