Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1041 ATGGCAACCAAAATAATCTCAGCCGACAGTAGGACTAGGAGCTCTATATCTATCTTCATTGTAGTTGGTTTGTGCTGTTTCTTCTATATATTGGGTGCATGGCAAAGAAGTGGTTTTGGGAAGGGGGACAGCATAGCTGTGGAGATGACCAAGAGTGGGGCAGACTGTAGTATTATCTCAAATTTGAATTTTGAGACCCATCATGGTGGTGAACCTGTGACAACTGATGATTCAGAATCAAAACCCAAAGTATTTAAGCCATGCCGTTCCAAATACATTGATTATACACCTTGCCAGCATCAGAAGCGGGCAATGACCTTCCCGAGGGAAAATATGGTTTACCGAGAAAGACATTGTCCAGCAGAAAATGAAAAGCTACATTGTCTAATCCCTGCACCAGAAGGATATGTAACACCTTTTCCTTGGCCAAAGAGTCGTGACTATGTACCCTATGCAAATGCACCATATAAGAGCTTGACAGTTGAGAAGGCTGTTCAGAACTGGATTCAATATGAGGGTAACGTGTTTAGGTTCCCAGGTGGAGGAACACAGTTTCCTCAAGGAGCAGATGCATATATTAATCAGCTTGCTTCTGTGATACCAATTGATAATGGTACAGTTAGAACTGCACTGGACACTGGATGTGGGGTTGCAAGCTGGGGTGCGTACCTTTTGAAGAAAAATGTCATAGCTATGTCATTTGCACCTAGGGACAATCATGAGGCACAGGTTCAGTTCGCTCTCGAAAGGGGTGTACCTGCTGTTATTGGTGTTCTTGGAACAATAAAGCTGCCATATCCATCTAGAGCTTTTGACATGGCCCACTGTTCTCGTTGCTTAATTCCATGGGGTGCAAATGATGGAATTTACATGATGGAAGTTGATAGAGTACTTAGACCTGGTGGCTACTGGGTGCTTTCAGGTCCTCCAATTAATTGGAGGAACAACTATAAAGCTTGGCTGCGGCCTAAAGAGGAACTCCAGGAGGAGCAGAGAAAGATTGAAGACATTGCCAGACTTCTTTGCTGGGAGAAGAAATATGAGCAAGGTGAAATTGCAATTTGGCAGAAGAGAGTGAATGCTGGTGCATGCAGTGGCAGACAAGATGATGCTCGAACTACATTTTGCAAAGCTGAAGAAACAGATGATACTTGGTACAAGAATATGGAGCCATGCATAAGTCCATATCCTGATGTTAATAGTCCAGAAGAAGTTTCTGGTGGAGAACTGCAGCCATTTCCCAAGAGGCTTTATGCTGTCCCTCCTAGAGTAGCTAGTGGATCTATTCCTGGAGTCTCTGTTGAGACATACCTGGAGGACAATAAACTATGGAAGAAGCACTTAAATGCTTATAAAAAAATTAATAAAATTATTGACTCAGGAAGGTACCGAAACATCATGGATATGAATGCTGGGTTGGGAGGTTTTGCTGCTGCACTTGAATCTCCTAAATTGTGGGTTATGAATGTTGTACCCACCATAGCTGAGAAAAGTACTCTTGGTGCTGTATACGAACGAGGACTGATTGGCATCTACCATGACTGGTGTGAAGCCTTCTCTACATACCCAAGGACATACGACCTTATTCACGCCCATGGTGTTTTCAGTTTATACAAGGACAAATGTGATGCGGAGGACATTCTTCTGGAGATGGATCGGATTTTGAGACCAGAAGGTGCCGTCATATTCCGCGATGAAGTTGATGTGCTAATCAAAGTGAAGAAAATAGTAGGAGGAATGAGATGGGATACAAAATTGGTGGATCATGAGGATGGTCCCCTTGTTTCTGAGAAGATATTGGTCGCAGTTAAACAATACTGGGTTGTGAGTGCAGAGAATTCCACATCCTCGCAGTAA 1857 0.4324 MATKIISADSRTRSSISIFIVVGLCCFFYILGAWQRSGFGKGDSIAVEMTKSGADCSIISNLNFETHHGGEPVTTDDSESKPKVFKPCRSKYIDYTPCQHQKRAMTFPRENMVYRERHCPAENEKLHCLIPAPEGYVTPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPQGADAYINQLASVIPIDNGTVRTALDTGCGVASWGAYLLKKNVIAMSFAPRDNHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWGANDGIYMMEVDRVLRPGGYWVLSGPPINWRNNYKAWLRPKEELQEEQRKIEDIARLLCWEKKYEQGEIAIWQKRVNAGACSGRQDDARTTFCKAEETDDTWYKNMEPCISPYPDVNSPEEVSGGELQPFPKRLYAVPPRVASGSIPGVSVETYLEDNKLWKKHLNAYKKINKIIDSGRYRNIMDMNAGLGGFAAALESPKLWVMNVVPTIAEKSTLGAVYERGLIGIYHDWCEAFSTYPRTYDLIHAHGVFSLYKDKCDAEDILLEMDRILRPEGAVIFRDEVDVLIKVKKIVGGMRWDTKLVDHEDGPLVSEKILVAVKQYWVVSAENSTSSQ* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1041 618 FunFam probable methyltransferase PMT2 162 360 - -
Vvi1g1041 618 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 451 566 IPR029063 -
Vvi1g1041 618 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 22 607 IPR004159 GO:0008168
Vvi1g1041 618 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 604 IPR004159 GO:0008168
Vvi1g1041 618 Gene3D Vaccinia Virus protein VP39 162 379 IPR029063 -
Vvi1g1041 618 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 334 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1041 Vvi-Chr1 11821587 11825525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1041 - - vvi:100258541 1288.86