Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1040 ATGGCTATGGTTACATTGACATCAGGGTGCAACAACTTCTCGCATAGTGATAATCACCTTCGTGATGTCTCCTTTTCTTCTTACGTAAATGGCACTGATGAACCCTTTGTACTTAAACTTGCTGAGTCAAATGGAAGTCTCAGTACCATCACCACTTCCCCACAGGAGCGTCTTTACTTGGGACGAAAGAAGGCGGAAGATGGAGAGATCGGTGTCTTTGGTGCGGAGAAATACTTTAATGGAGGAATGGATGAAGGGAAGCCAAGCATTGCCAACAAGATTCGAGGAATGAATGAGACGCCAAGACTTGCCAACAAGAATGGAGGAACGAATGAGGAGAAGTCATTAACTGCCAGCAAGAGTGCAAGGAGGTGCCAACATCAGAACGAGGAAGGGGTTGGTTTTGAAGCTATCAAACCAAAAATTCAGCCAGGAACTCCAAGCATGATTTCAGAATCAAGTTTTATGCGTTCAGAATCAAGCTGGGATAGTCAAAGCGCGTTGCTGACAAGTGTTCTGAGAAACCCACCTCGGAATAAGACAAAGATGACACCAGGAAAAAGTTTGCTCGCCAGTCTATGTTGCAAATGCTCTTGTTCTGATAAGAACTCTGTAGAAACTGATGAATATGTTGGTGAAAACAGGTCCAACAAAGGTGCTAGCTGTGGAGGAGTTGATGGTGAAGCAATCACCAAAGAACCCATTAAAACTGGCCGGGAACTAATTGATCTAGTTCAAATTAACAAACAAAGGTCAGAATCTTGGGGCAAGGAGGCGATGCACCACAAGAAATTCAATGAGTTGGGAATTGGGCTGCACAGAGAAAACTGTTTTACGCTCCCAGTTGCAAAATCCGGAGCAGGAAATCTGGCAGTTAAATTACAGTTAGGAGAAGGGGAAGGGAGGAAGCCCCGGAAGTCCTTAGAGATATTTGGGTCCCCTATACTGCAAAAGGGACACAAGTCTTTAAGCCTTGAGAGAAGGTTGACCATGTTGAGTTGGGAAGCTACTCCAAGAGTAGAGGAACCTGGAATCAACAATGATACCGAGAGTGATGCAAGTTCAGACTTGTTTGAGATAGAGAGCCTCTCCAGCAGAGTGGCCCCATTTTTAGCACGCCAAGAATCAGATGGCATGTCTGGCTGCATCACTCCCACAACTTGTTATGCACCAAGCGAAGCAAGCATAGAGTGGAGTGTCGTTACGGCCAGTGTTGCAGATTACTCGGTGATGTCAGACAGTGATGAGCAAAGGCCACCGTCGATCACATCCAGTAAACCAGTTTTTACAAGTATTACACCTACCAAAACTGCAAGCAAAGAGGTAAAGAGGCGTCCTCCAAGCATTCTGTCCGGCTGCAAGAATGACAAGGCTGTGAGAGTTGCAGGAGATGCCTACATGACAAATGATAAGGCAATTTCTGATCCAAGAGGGCGTCCCAGGTCTTCAGCGTTCGTCCCAATGCCTACGACAAGGTTTGAAGCAGAGACTACACTGACCGGGTTTGGCTCCGGAAGCTCATTCTCCCGCTCACACTCGCAACATGCTTCGCATCTTTTATACATCTAG 1569 0.4621 MAMVTLTSGCNNFSHSDNHLRDVSFSSYVNGTDEPFVLKLAESNGSLSTITTSPQERLYLGRKKAEDGEIGVFGAEKYFNGGMDEGKPSIANKIRGMNETPRLANKNGGTNEEKSLTASKSARRCQHQNEEGVGFEAIKPKIQPGTPSMISESSFMRSESSWDSQSALLTSVLRNPPRNKTKMTPGKSLLASLCCKCSCSDKNSVETDEYVGENRSNKGASCGGVDGEAITKEPIKTGRELIDLVQINKQRSESWGKEAMHHKKFNELGIGLHRENCFTLPVAKSGAGNLAVKLQLGEGEGRKPRKSLEIFGSPILQKGHKSLSLERRLTMLSWEATPRVEEPGINNDTESDASSDLFEIESLSSRVAPFLARQESDGMSGCITPTTCYAPSEASIEWSVVTASVADYSVMSDSDEQRPPSITSSKPVFTSITPTKTASKEVKRRPPSILSGCKNDKAVRVAGDAYMTNDKAISDPRGRPRSSAFVPMPTTRFEAETTLTGFGSGSSFSRSHSQHASHLLYI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1040 522 MobiDBLite consensus disorder prediction 412 450 - -
Vvi1g1040 522 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 12 497 IPR039615 GO:0009638
Vvi1g1040 522 MobiDBLite consensus disorder prediction 412 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1040 Vvi-Chr1 11816251 11817819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1040 - - vvi:104879773 999.964