Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1028 ATGGGGTCAGAGAATTTTCTCACCGTGGTGGCTAAGAACTTCGATGTTTTTGCAGGGCCTCTGGTTGCTCTTGTTTATCCTCTGTATGCTTCAATTAAGGCTATAGAGACCAAGTCTCGGGCGGATGATCAGCAATGGCTTACGTATTGGGTTCTGTATTCTTTGATCACACTCTTTGAGCTTACCTTTGCCAAGCTCCTCGAATGGTTCCCCATTTGGCCTTATGCTAAGCTGATTGCTACATGCTGGCTGGTACTACCCTCCTTCAATGGGGCAGCATATGTTTATAAGCATTTTATTAGGCCTTTCTACATGAGCCCGCAAACTTCTCAAATCTGGTATATTCCACGGAAAAAGGATATCTTCGGCAAACCAGATGATGTTTTAACTGCTGCAGAGAAATATATTGAAGAGCACGGGACAGAAGCATTTGAAAGGATGATAAGCAAAGCTGACAGAGAAGCAAGAGCCAGGAGGAGCAATTATATGATATTTGAGGAAGACTACGGATATTGA 516 0.4341 MGSENFLTVVAKNFDVFAGPLVALVYPLYASIKAIETKSRADDQQWLTYWVLYSLITLFELTFAKLLEWFPIWPYAKLIATCWLVLPSFNGAAYVYKHFIRPFYMSPQTSQIWYIPRKKDIFGKPDDVLTAAEKYIEEHGTEAFERMISKADREARARRSNYMIFEEDYGY* 172
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1028 171 PANTHER HVA22-LIKE PROTEINS 20 139 IPR004345 -
Vvi1g1028 171 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g1028 Vvi-Chr1 11600259 11601671 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1028 K17279 - vvi:100255163 356.295