Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1004 ATGATAAAGCTCTGGTCCCGAAGCAGTTCTGGAGGTGCTCCTTGGTGGAGTTACTGGAGTGCTGGCATTACAAATACAATTGGTCCAACCATGGGGATAGAAGCTCTAAAGTATATAAGTTACCCAGCACAGGTCCTGGCGAAATCCTCAAAAATGATTCCAGTGATGCTGATGGGTTCCCTGGTCTATGGTATTAGATACACAATTCCTGAGTATGTTTGTACTCTTCTTGTTGCGGGAGGTGTATCTTCATTTGCACTTTTAAAGACTAGTTCCAAGACAATTAGCAAGTTGGCACGCCCAAATGCACCACTTGGATATGGGCTCTGTTTCTTGAACCTTGCATTTGATGGATTCACAAATGCCACACAGGATTCAATAACAGCAAGGTACCCAAAGACAAGTGCATGGGATATAATGTTCGGAATGAATTTATGGGGTACCATATACAACATGGTTTACATGTTTGGATGGCCACATGGGAGCGGATTTGAGGCAGTCCAATTCTGCAGGCAACATCCAGAAGCAGCATGGGACATTTTCCTCTTCTGCCTTTGTGGTGCAGTGGGACAGAATTTCATCTTTCTTACCATAAGCCAATTTGGCTCCCTCACTAACACTACCATCACCACAACCCGCAAGTTTGTAAGCATTGTGGTGTCTTCACTTCTTAGTGGCAATCCCCTGTCGGCAAAGCAATGGGGAAGTGTTTCCATGGTCTTCTCTGGGTTGTCATACCAGATATATCTCAAGTGGAAGAGGGGGCAGAGATTGCACAAGAAGAGAAAGCCCATGTGA 798 0.4499 MIKLWSRSSSGGAPWWSYWSAGITNTIGPTMGIEALKYISYPAQVLAKSSKMIPVMLMGSLVYGIRYTIPEYVCTLLVAGGVSSFALLKTSSKTISKLARPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMFGMNLWGTIYNMVYMFGWPHGSGFEAVQFCRQHPEAAWDIFLFCLCGAVGQNFIFLTISQFGSLTNTTITTTRKFVSIVVSSLLSGNPLSAKQWGSVSMVFSGLSYQIYLKWKRGQRLHKKRKPM* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1004 265 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 10 252 IPR013657 GO:0055085
Vvi1g1004 265 Pfam UAA transporter family 8 250 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1004 Vvi-Chr1 11252074 11255754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1004 13 257 Organic Solute Cotransporters AT5G59740 32.927 9.14e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1004 K15275 - vvi:100258453 547.74