Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0999 ATGGAACTTCCCCAGAATCAAAACAACGGCTATGTCACCGTCATCATTTCTGTCCTGGTACTCTCTGGATTTACTGTCATGGATCTTGCTGATGCAGTTTGGGTAAGCCATGGAGGCGATTTGGGTAACACAAGATCACGCTCCATTCATGACGAGCCCTTCATCAATCCGGTGCTTATTTCCAAATTGCAGTTAAAATGGAAATTTTTCACTGGTGATGACACAACTGCTACCCCAGCGGTGGCCGATGGGGTAGTCTACTTCCCATCATGGAATGGATATTTGTATGCAGTGAATGCATTTAACGGTGCTCTTGTATGGAGGAGGCATCTAGGGGAGCTCACAGGGCTTAGTCCAACAGGGATTGTAGTGAATGTAACTGTGTCAAGAACCACACCTGCAGTAGCTGATGATCTTATCGTTATAGGAATCTATGGCCCGGCAGTGGTTGTTGCTGTCAACCGATTAAAGGGGACGCTCGTGTGGTCCACCGTGCTAGATCCACATCCCAGATCTCAAATCACCATGTCTGGAACACCTTACTCCGGGGATTTCTACGTTGGCGTATCATCACTAGAGGAAGCCCTACCTCCTGAACAATGTTGCACTTTCCGGGGTAGCATGGCCAAACTAGACATTGGAACTGGAGAGGTACTCTGGAGAACCTATATGATTCCAGATAATGGTGGCCAAATAGGAGGCTACTCAGGAGCTGCTTTGTGGGGCAGTAGCCCTGCCATTGACATTAAAAGAGGTCTTGTTTATATTGGAACTGGAAACCTATACAGTGCTCCAGCTGAGGTGCTAGAGTGTCAAGCCAGGCGAAATAATCAAACAACCCCCTCTCAACCTGATCAGTGCGTCGACGATCCAAATGTTCACTTCGATTCCATTCTTGCCTTGGAATTACACTCCGGAAAAATCAGATGGTTTCGCAGATTCGAGAGCTATGATGTTTTTTATTTTGCATGCCTAGTGCCCAATAATCCAACCTGTCCTCCTGGACCTAACTTGGACGCTGACTTCGGAGAAGCTCCAATGCTGCTCACCATATTTTCAAATGGCACAAAACGTGATGTTGTTGTTGCTGTCCAGAAAAGCGGATATACGTGGGCTCTAGATCGCGACTCCGGTGATATAGTTTGGTTCAATGTGGCTGGACCAGGCGGTCTGGAAGGAGGAGGAGTGTGGGGTGCAGCTACAGACGGAAAAAGGGTTTACACAAATATAGTAAATAGCTATCTTGCGAGCTTCAGGCTAGCACCATCCAACCAAACCACGACGTCTGGGGCATGGGTAGCGTTGGACGCAAATACAGGCGAAATTGTGTGGTCCACAACAAACCCCAGCAATGAAACTGCACATGGTCCAGTTACGGTGGCCAATGGTGTGGTTTTTGCTGGGTCCGTGGCACCTTCAGGCCCATTCTACGGAATGGACGCAGAAACAGGAACTATAATATGGACATATAACACCAATGCCACCGTGTACGGTGGTGCATCAGTGAGCTACGGCTGTGTTTACCTGGGGCATGGGTATACAGTGGCCTTAGCCAAGTTCCATCCCAGTTGGAATCGTGGAACCTCACTCTTTGCATTCTGCACCTTGTGA 1611 0.4829 MELPQNQNNGYVTVIISVLVLSGFTVMDLADAVWVSHGGDLGNTRSRSIHDEPFINPVLISKLQLKWKFFTGDDTTATPAVADGVVYFPSWNGYLYAVNAFNGALVWRRHLGELTGLSPTGIVVNVTVSRTTPAVADDLIVIGIYGPAVVVAVNRLKGTLVWSTVLDPHPRSQITMSGTPYSGDFYVGVSSLEEALPPEQCCTFRGSMAKLDIGTGEVLWRTYMIPDNGGQIGGYSGAALWGSSPAIDIKRGLVYIGTGNLYSAPAEVLECQARRNNQTTPSQPDQCVDDPNVHFDSILALELHSGKIRWFRRFESYDVFYFACLVPNNPTCPPGPNLDADFGEAPMLLTIFSNGTKRDVVVAVQKSGYTWALDRDSGDIVWFNVAGPGGLEGGGVWGAATDGKRVYTNIVNSYLASFRLAPSNQTTTSGAWVALDANTGEIVWSTTNPSNETAHGPVTVANGVVFAGSVAPSGPFYGMDAETGTIIWTYNTNATVYGGASVSYGCVYLGHGYTVALAKFHPSWNRGTSLFAFCTL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0999 536 Gene3D - 24 533 - -
Vvi1g0999 536 SMART ire1_9 79 110 IPR018391 -
Vvi1g0999 536 SMART ire1_9 457 491 IPR018391 -
Vvi1g0999 536 SMART ire1_9 133 165 IPR018391 -
Vvi1g0999 536 SMART ire1_9 408 447 IPR018391 -
Vvi1g0999 536 SMART ire1_9 245 313 IPR018391 -
Vvi1g0999 536 Pfam PQQ-like domain 76 310 IPR002372 -
Vvi1g0999 536 Pfam PQQ-like domain 372 502 IPR002372 -
Vvi1g0999 536 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 32 534 - -
Vvi1g0999 536 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 30 499 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0999 Vvi-Chr1 11184010 11186116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0999 - - vvi:104879808 1099.73