Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0983 ATGGCACAAGCACAGGAAGCTAAGGAGAGTCCACAACTTTTAAGTTGTGATGCTTATTTCGAGAACATCCAGTCGAGGAAAAAACTACCACGATCCTTGCAGGAGTCTCTAACAGCTGCATTTGCAAGGATTCCAGTTTCATCTTTCCCTGAAGTACTTGGGGGCAAAGTGGTTGAAATTCGGGGTGATGCAATAATTGCAGAGGCAGTTAAAACTCTATCTCTCTGCAACATTTTGTCTGCCCCTGTGAGGAACCCAGATGCAGGAACCAGTTTGGATTGGAGAGAGAGGTACCTGGGAATCATAGATTACTCAGCGATCATACTTTGGGTGCTAGAGAGTGCGCAGCTTGCTGCAGTTGCTTTTTCTGCCAGTACTGCTACCGCTGCTGGAGTAAGTGCAGGGGCAGTTGGAGCACTTGGAGCACTAGCATTGGGAGCAACAGGGCCTGCTGCTGTTGCTGGAATAACTGTTGCTGCAGTTGGGGCAGCGGTGGCTGGTGGAATGGCTGCTGATAGAGGGATGGGGAAAGATGCTCCCACTGCTGCTGATCATTTGGGAGAGGAGTTCTATAAAGTTCTCTTTCAAGAAGAACCTTTCAAATCAACCACAGTGCAGTCCATACTGAAATCATATCGCAGTGCTCCCTTCCTTCCAGTTGCAACAGATAGTTCTATGTTGAGCGTCTTATTGCTACTCTCCAAATATAGAATGAGGAATGTACCTGTAATCGAACCAGGCCAACCTTTTGTTAAGAACTACATTACACAATCTGCAATTGTTCAGGGCCTTGAGAGATGCAAAGGGAGGGATTGGTTCGATTGTATTGCAGCACATCCTATTTCTGATTTAGGACTTCCTTTCATGTCTCATAATGAGGTTGTTACCATCCAGAGCAATGAGCTGATTCTGGAGGCTTTCAAGAAAATGAAAGACAATAAAATTGGTGGCCTTCCTGTGGTAGAGGGCCCAAGGAAGAAGATTGTTGGGAATGTAAGCATAAGAGATATCAGATTCTTGCTGCTCAATCCAGACCTCTTCTCCAATTTCAGGTCAGTTAAAAAGCAGACCTGCACCACCTGTCAAGTTACCTGTTTCTTGGCTTTGAAATATTCTAGTTGTCGAATGCTCCGAACATGGAAATTTTTTTAA 1152 0.4514 MAQAQEAKESPQLLSCDAYFENIQSRKKLPRSLQESLTAAFARIPVSSFPEVLGGKVVEIRGDAIIAEAVKTLSLCNILSAPVRNPDAGTSLDWRERYLGIIDYSAIILWVLESAQLAAVAFSASTATAAGVSAGAVGALGALALGATGPAAVAGITVAAVGAAVAGGMAADRGMGKDAPTAADHLGEEFYKVLFQEEPFKSTTVQSILKSYRSAPFLPVATDSSMLSVLLLLSKYRMRNVPVIEPGQPFVKNYITQSAIVQGLERCKGRDWFDCIAAHPISDLGLPFMSHNEVVTIQSNELILEAFKKMKDNKIGGLPVVEGPRKKIVGNVSIRDIRFLLLNPDLFSNFRSVKKQTCTTCQVTCFLALKYSSCRMLRTWKFF* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0983 383 SMART cbs_1 216 265 IPR000644 -
Vvi1g0983 383 SMART cbs_1 293 342 IPR000644 -
Vvi1g0983 383 Gene3D - 51 268 IPR046342 -
Vvi1g0983 383 SUPERFAMILY CBS-domain pair 275 349 IPR046342 -
Vvi1g0983 383 ProSiteProfiles CBS domain profile. 289 347 IPR000644 -
Vvi1g0983 383 Gene3D - 286 364 IPR046342 -
Vvi1g0983 383 SUPERFAMILY CBS-domain pair 37 263 IPR046342 -
Vvi1g0983 383 Pfam CBS domain 289 342 IPR000644 -
Vvi1g0983 383 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 47 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0983 Vvi-Chr1 10984996 10986663 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0983 - - vvi:100243233 573.548