Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0979 ATGGCGATGCAAACTGGTGTAGGGGTTTCAAAGATCCTGATCCTGGTTGGAGCAGGATACACCAGTACGATCTTGCTCAAGAATGGCAAATTGTCGGATATATTGGGTGAACTTCAGTCATTGGTGAAAGGATTGGAGAAAAAAGGGGATTCATCAAATGGTGAAGCTGACTATTCTGATGCTATTGCTGCCCAGGTCCGTCGGTTAGCAATGGAGGTCAAACAACTTGCCTCAGCTCGACAGATAACTGTTCTAAATGGGAATTCTGGCCAAATTGGCAACATAACATCACTTGCAATCCCAGCTGCCACCTTGGGGGCATTGGGATATGGTTACATGTGGTGGAAGGGTCTTTCAATATCAGATCTTATGTATGTAACGAAGAAGAATATGGAAACTGCGGTTACAAACTTGAAAAAGCATCTGGAGCATGTCTCAGACGCTCTTTCTGCAACAAAAAGGCATTTGACACAGCGAATTGAGAATTTGGATGGAAAACTGGATGAGCAGAAGGAGATCTCGAAGTTAATTAAGAATGAGGTTACTGAAGCTCGTGGTGATATTTCTCAAATTGGCTTTGACTTGGATTCACTACAAAGGATGGTCTCTGGATTGGATGGGAAGATAGGTTCATTGGAATATAAGCAGAATTTTGCAGTTGAGGGTGTGGTGTACCTGTGCAACGCTGTTAATGGAAGAAGTGTACCAATGTCTGAAACTATGCTGAAACAGCTTAAACTACCTGGCAAGTCCCACGGTTTACTCACATCTACAGAAGCTCCAAGTTTCCAGGGTCTTAAGGAGATTGCAGGCAGTATAATATCTGAAAATTCCAGATCTTCAAATGGTATCGTGCAAGATGGTGTTGATAAATTGGATGATCAGCCAAGGAGCCTGACAAGGACTTTTTCTGTGAAGTGTTGA 924 0.4286 MAMQTGVGVSKILILVGAGYTSTILLKNGKLSDILGELQSLVKGLEKKGDSSNGEADYSDAIAAQVRRLAMEVKQLASARQITVLNGNSGQIGNITSLAIPAATLGALGYGYMWWKGLSISDLMYVTKKNMETAVTNLKKHLEHVSDALSATKRHLTQRIENLDGKLDEQKEISKLIKNEVTEARGDISQIGFDLDSLQRMVSGLDGKIGSLEYKQNFAVEGVVYLCNAVNGRSVPMSETMLKQLKLPGKSHGLLTSTEAPSFQGLKEIAGSIISENSRSSNGIVQDGVDKLDDQPRSLTRTFSVKC* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0979 307 Pfam Protein of unknown function (DUF1664) 93 216 IPR012458 -
Vvi1g0979 307 Coils Coil 153 180 - -
Vvi1g0979 307 PANTHER OS05G0182700 PROTEIN 1 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0979 Vvi-Chr1 10863770 10880182 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0979 - - vvi:100246806 592.423