Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0974 ATGGGAAAGGGTCCAGGTCTCTACTCCGACATTGGCAAGATAGCCAGAGATCTTCTCTACAGGGATTACCAGAGTGACCACAAGTTCACTGTTACTACTTACACATCCTCTGGAGTCGCCATTACTTCATCAGGAACTAAGAAAGGTGAGCTTTTTATTGCGGATGTGAATACCCAGTTGAAGAACAAGAACATAACAACAGATGTGAAAGTCGATACAAACTCTAATCTTTTTACGACAATTACTGTTGATGAACCTGCACCTGGACTCAAGACGATATTTAGCTTTATCATTCCTGATCAGAGATCTGGTAAGGTGGAACTCCAGTACTTGCATGAGTATGCTGGAATAAGCACTAGCATTGGATTGACTGCAAATCCAATTGTGAACTTCTCTGGTGTGGTTGGGAACAATACTCTCTCTCTTGGGACTGATCTCTCGTTTGACACTGCCACTGGGAACTTCACCAAATGCAATGCAGGCCTGGGTTTCTCCAATGCTGACCTCATTGCTGCCTTGACTTTGAATGACAAGGGTGACACACTTAATGCTTCATACTACCACACTGTAAGCCCACTGACTAACACAGCTGTTGGTGCGGAGCTGAGCCATTGCTTTTCTACCAATGAAAACACTCTTACCATTGGCACACAGCATGCCCTGGACCCCTTAACCAAGGTGAAGGCTCGGGCTAATAACAGTGGAAAGGTAAGTGCTCTAATCCAGCATGAGTGGCGCCCAAAATCCCTCTTCACTATATCAGGAGAAGTGGATGCCAGGGCGGTTGAGAAAAGTGCAAAGATTGGACTGGCCTTGGCTCTAAAGCCATAG 831 0.4561 MGKGPGLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGDTLNASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSALIQHEWRPKSLFTISGEVDARAVEKSAKIGLALALKP* 277
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0974 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vvi1g0974 276 Gene3D Porin 2 275 IPR023614 -
Vvi1g0974 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Vvi1g0974 276 FunFam Outer mitochondrial membrane protein porin 1 275 - -
Vvi1g0974 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0974 Vvi-Chr1 10815506 10818957 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0974 K15040 - vvi:100248362 546.584