Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0973 ATGCTCCACTTATTAAACATTTTTGTTATTTTAAAAAATATAATATTCATATTTAACCTTGAAAGGGGACCGAATGCCCCATATTTTAGAAGTTTCTTGGCATTGTGCCATTCTCGCTTCCAAGCTCACAAATATCTTATCGGTCTATCTCTATCGCCCTTATATATTACCACCCTTTCTCTCTGCTCTCAATTCTCTTCTTCTCCTCATCGCTCCCTCTGTATCGGATCGGGGTTCCATAGACTCTTAAGAATCATTACAATGGGACAAGCTTTTTGTTGTATTCAAGTGGACCAGTCTAATGTAGCTATCAAAGAACAATTTGGAAAGTTTGATGAGGTGCTTGAACCTGGTTGCCATTGTTTGCCATGGTGTTTTGGGAGCCAGTTAGCTGGTCATCTTTCATTGCGTGTGCAGCAGCTAGATGTTCGATGTGAAACGAAAACTAAGGATAATGTTTTTGTTACTGTTGTTGCATCTATTCAATATCGAGCCTTAGCAGAAAAGGCATCTGATGCTTTCTATAAGCTCAGCAACACCAGAGCACAGATCCAAGCCTACGTCTTTGATGTAATTAGAGCTAGTGTTCCAAAGTTAGACCTGGATTCAACCTTTGAACAGAAGAATGAAATAGCGAAAGCTGTGGAAGAGGAACTTGAAAAGGCAATGTCAGCTTATGGATTCGAGATAGTTCAAACACTTATTGTGGATATCGAACCAGATGAGCATGTGAAAAGAGCAATGAATGAGATAAATGCAGGAGCCTTTGGAAGGTGGAATGAGTCTGCTTTTTCAGATAAGCTGGCGAGAAGCCATTGCTTAATTTGA 828 0.3973 MLHLLNIFVILKNIIFIFNLERGPNAPYFRSFLALCHSRFQAHKYLIGLSLSPLYITTLSLCSQFSSSPHRSLCIGSGFHRLLRIITMGQAFCCIQVDQSNVAIKEQFGKFDEVLEPGCHCLPWCFGSQLAGHLSLRVQQLDVRCETKTKDNVFVTVVASIQYRALAEKASDAFYKLSNTRAQIQAYVFDVIRASVPKLDLDSTFEQKNEIAKAVEEELEKAMSAYGFEIVQTLIVDIEPDEHVKRAMNEINAGAFGRWNESAFSDKLARSHCLI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0973 275 Pfam SPFH domain / Band 7 family 96 252 IPR001107 -
Vvi1g0973 275 SUPERFAMILY Band 7/SPFH domain 133 251 IPR036013 -
Vvi1g0973 275 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 88 251 - -
Vvi1g0973 275 CDD SPFH_like_u4 97 253 - -
Vvi1g0973 275 Gene3D Band 7 domain 129 253 IPR036013 -
Vvi1g0973 275 Coils Coil 205 225 - -
Vvi1g0973 275 SMART PHB_4 92 252 IPR001107 -
Vvi1g0973 275 FunFam Hypersensitive-induced response protein 1 128 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0973 Vvi-Chr1 10805860 10812907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0973 - - vvi:100253479 333.183