Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0970 ATGAATTTTTTGATGCGACCTTCGCATACTGCACATGCAGATGAGCCACCTGTTCATGAAATTTCTAAGGGCACACAACATGTGACAAAACCTACAGCAACTTTGGAGGGTCTTATAGCTGAAGATTCATTTCCAAATTATTTTGTGGATGAAATTCATGGTGAAGTTGGAGGTGAAAATGGCAGTGTTGCAGGTCTAAGTTCAAAAAGTGACTCTCCTGACCTGGTGAACCTCTCAGATGTTACAGAAGAAGAAGGATGGATAATTATCCCACAAAAGGAACTTCCTGATAATTGGAGAGATGCACCAGACATATGTTCCTTTCGCTCCCTTGACCGCTCCTTTGTTTTTCCTGGTGAACAAGTTCATATACTGGCATGTCTGTCATCCTCTAAGCAGGAGACACAAATTATTACTCCATTTAAAGTTGCTGCAATGATGAGTAAAAATGGCATAGGGCAAAGCACAAAGAAACAAAGTGGAGAGACTGAAGATGAAACCAATTCGATGTTAGGAAAAGTGGAAGCGAATCCTGCTGGTGAAGATACTTATCACAATGGTGAAAACCTGTTAAAAGAAAAGATTGATTCAGAAAAGGATATTTCTGCTAGTGAATCTCTTCTTAGGATGGAAGATCACAAAAGACAAACTGAAATTTTATTGCAAAAATTTAAGAACTCTCATTTTTTTGTTCGGATTGCCGAGTCAGGCGAGCCTCTCTGGTCAAAAAGAAATGCTGCAGAAACATCTCTACAATTTTCTGAAATGTCTGCTCCTAAGTCTACTGCGATTAAAACTAGAAAGACTGCTAAAGAAATTACTCCTCTTACTGCTGTTATTGATAAAGGGAATTTTAATGCCAATGTCTCTGGTGGTGTAGCAAGAAACATCGTTGATTGTTGCTCTCTTTCTAATGGAGACATAGTGGTTCTTTTACAAGTGAATGTTGCTGTTGATTCTCAGAGAGATCCTGTCCTTGAGATTCTTCAATTTGAGAAATATAATAATGACAAATTTTCTTCTGAGAACAAGGACAGCTTAGTCTACGCAAACCAGGATCCATGTGGGGAACTACTAAAATGGTTGCTTCCTTTGGATAATACTCTTCCCCCTCCCACCCCTGCATTGTCTCCTCCTCCTTTGAGTTCCAGTTCTGGCATTGGTAGCACATCTCAAAGATCCACTCTTTCTGCATCATCTGGCTCTCAACTCTTCTCTTTTGGCCACTTCAGAAGTTACTCCATGTCATCACTTCCTCCTCAAAGTACTCCTCCACCACCTCCATCTGTTGCAACTCCAAGCTCTAAACCAAACTTTGAACTTGAAGATTGGGATCGGTCCTCACCTCAGAAGTTTGTGAAGAGTAAAAAGACTGGAAGTGAAGAGCTGTTATCTTTTCGAGGTGTCTCACTAGAGCCAAAAAGGTTTTCTGTTTGTTGTGGGTTGGAAGGCATCTATATACCAGGAAGAAGGTGGAGGAGGAAACTTGAAATTATTCAACCTGTTGAGATCCGTTCTTTTGCTGCTGACTGCAACACAGATGACCTTCTATGTGTTCAGATAAAGAATGTTTCACCAGCGCATACACCTGATATTGTGGTATTCTTAGATGCTATAACAATTGTTTTTGAGGAGGCTTCAAAAGGGGGATCACCTTGTTCGTTACCAATGGCATGTATTGAAGCTGGGAATGATCACAGTTTGCCAAATTTACCCCTCAGGAGAGGTGAAGAACACTCTTTTATTCTCAAACCCGCAACTTCAGCTTGGAAGCGTCTTAAGGCTCAACGTGAAAGCTCTCAATCATCTCATTTACCTGTTAGAAATACAGCATCATTGATGGGAAAAGGAGGCCTTCCATCCAAGATCGTTGAAGGGAAAAGGAGCACTCTAACTTCTGATCAGTATGCTGTTTTAGTTTCATGTCGGTGCAACTACACTGAATCGAGATTGTTTTTCAAGCAGCCAACAAGCTGGCGACCACGTATCTCAAGGGATCTTATGATTTCTGTTGCATCTGAAATGTCAAGACAACCTCTTGGACCCAATGGAAGAGTCTCTGAGCTTCCTGTTCAGGTGTTAACCCTTCAGGCTTCAAATTTAACATCCGAAGATCTAACCTTAACAGTTCTTGCTCCGGCCTCATTTACTTCACCTCCTTCAGTGATGACCTTGAACTCTGCACCCTCATCTCCAATGAGACCGTCCGTTGGTTTTTCCTCGTTTGCAGGAAAATTAGGTGATGGGAGACATGATACTGCCATGCCAAGGCAGACTTCGGCACCTATGCTATCAGAGAATCACAAAGAGAATGGTGATTTTGGAGCTCAATCTGTTTCTTCTAATGAGCAGGCTGCTCCTCTATCTGATATCATCCCAAATACTGGTTTGGGTTGTACGCATCTATGGCTGCAGAGTAGAGTTCCATTAGGATGTGTTCCTTCTCAATCTACTGCTACCATCAAGCTGGAGCTGCTTCCTTTAACTGATGGCATAATCACACTTGATACTTTACAGATTGATGTTAAGGAGAAAGGTCATACCTACATCCCTGAGCATTCTCTGAAGATCAATGCAACTTCCAGCATTTCCACTGGGATTGTTTAG 2607 0.4162 MNFLMRPSHTAHADEPPVHEISKGTQHVTKPTATLEGLIAEDSFPNYFVDEIHGEVGGENGSVAGLSSKSDSPDLVNLSDVTEEEGWIIIPQKELPDNWRDAPDICSFRSLDRSFVFPGEQVHILACLSSSKQETQIITPFKVAAMMSKNGIGQSTKKQSGETEDETNSMLGKVEANPAGEDTYHNGENLLKEKIDSEKDISASESLLRMEDHKRQTEILLQKFKNSHFFVRIAESGEPLWSKRNAAETSLQFSEMSAPKSTAIKTRKTAKEITPLTAVIDKGNFNANVSGGVARNIVDCCSLSNGDIVVLLQVNVAVDSQRDPVLEILQFEKYNNDKFSSENKDSLVYANQDPCGELLKWLLPLDNTLPPPTPALSPPPLSSSSGIGSTSQRSTLSASSGSQLFSFGHFRSYSMSSLPPQSTPPPPPSVATPSSKPNFELEDWDRSSPQKFVKSKKTGSEELLSFRGVSLEPKRFSVCCGLEGIYIPGRRWRRKLEIIQPVEIRSFAADCNTDDLLCVQIKNVSPAHTPDIVVFLDAITIVFEEASKGGSPCSLPMACIEAGNDHSLPNLPLRRGEEHSFILKPATSAWKRLKAQRESSQSSHLPVRNTASLMGKGGLPSKIVEGKRSTLTSDQYAVLVSCRCNYTESRLFFKQPTSWRPRISRDLMISVASEMSRQPLGPNGRVSELPVQVLTLQASNLTSEDLTLTVLAPASFTSPPSVMTLNSAPSSPMRPSVGFSSFAGKLGDGRHDTAMPRQTSAPMLSENHKENGDFGAQSVSSNEQAAPLSDIIPNTGLGCTHLWLQSRVPLGCVPSQSTATIKLELLPLTDGIITLDTLQIDVKEKGHTYIPEHSLKINATSSISTGIV* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0970 868 PANTHER EXPRESSED PROTEIN 1 867 - -
Vvi1g0970 868 MobiDBLite consensus disorder prediction 419 433 - -
Vvi1g0970 868 MobiDBLite consensus disorder prediction 758 780 - -
Vvi1g0970 868 MobiDBLite consensus disorder prediction 1 27 - -
Vvi1g0970 868 MobiDBLite consensus disorder prediction 749 780 - -
Vvi1g0970 868 MobiDBLite consensus disorder prediction 380 396 - -
Vvi1g0970 868 MobiDBLite consensus disorder prediction 370 396 - -
Vvi1g0970 868 MobiDBLite consensus disorder prediction 416 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0970 Vvi-Chr1 10706822 10741580 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0970 - - vvi:100255337 1632.08