Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0967 ATGGAAGAAGGGAACCAGCAACACAGATGGGAAGGCTATGTGGATTGGAGGGGCAGGCCTGCACTCAGAGGCCGCCATGGTGGCATGCTTGCAGCTTCCTTCGTCTTGGGTGTGGAGATCCTAGAGAACTTAGCATTTTTGTCAAATGCAAGCAACCTGGTGCGATACCTGTCGGATTACATGCACTTCTCTCCCTCGAAATCAGCCAACAATGTCACAAATTTCATGGGAACAGCCTTCCTTCTTGCCCTTCTTGGAGGCTTCTTATCCGATGCTTTCTTCACTCCTTATCACATCTACCTGATAAGTGCAGTTATTGAATTTCTGGGTCTGATTGTGCTGACAATACAAGCGAGGTCACCTTCTCTAAAGCCACTGGAGTGCAAGAAAGGAACAGCAGACACTTCATGCCAGGTGTTGAGTGGCGGAAAAGCGGGAATGCTGTTCGTAGGCCTGTATCTGGTGGCGCTGGGTGTGGGAGGGATAAAGGGGTCTCTGCCTGCCCATGGGGCTGAGCAATTGGATGAGAGTACTCCCCAGGGAAGGAAGCAGAGATCAACCTTCTTCAATTACTTTGTCTTCTGTCTCTCATGTGGGGCTCTAATTGCAGTGACGTTGGTGGTGTGGGTTGAAGACAATAAGGGGTGGGAGTGGGGGTTTGGAATTGCTACTATTTCAATCTTTGCATCCATTCCAGTCTTCCTTGGTGGCTCTGCTACTTATAGGAACAAGATACCTTCTGGAAGCCCACTTACAACCATTTTCAAGGTATTGATTGCTGCCACACTCAACAGAAGCCCAAGCAATGCAGTTGCAAGCATGGCAACAAGCCCTTCTTATCCAACCCAAAATAGCAAGGAACCAGAAGAAGAAAATGGCAAAGCAATAGTGCCCGCTCAAACGCCCACAGAATCACTTGGCTTCCTCAACAGAGCAGTGGTAAACAAGCCAGTTTACAAAGCAGTAGAATGTACAGTTCAGCAAGTAGAGGAGGTAAAGATTGTGATTAAGATCCTCCCCATTTTTGCTTGCACCATCATGCTAAACTGCTGCCTGGCTCAGCTCTCAACATTTTCTGTCCAACAAGCTGCCACCATGAACACAAAGCTTGGTTCTTTGAAAGTTCCGCCAGCTTCCCTCCCTATTTTCCCTGTACTCTTCATGATGACACTTGCACCAATCTACGACCATTTCATCATCCCATTTGCCAGGAAAGTAACCAAAACCGAAATGGGCATCTCTCATCTGCAACGAATTGGGATTGGTCTAGTCTTCTCCATTATAGCCATGGCAGTCGCAGCTCTAGTTGAGGTCAAGCGTAAGAGAGTGGCTTCCAACTTGGGGCTAATCGACTCCACTGAACAACTACCCATCACATTCTTTTGGATTGCCTTCCAGTACTTGTTCCTTGGATCAGCAGACCTTTTCACCTTGGCTGGGTTGATGGAATTTTTCTTTACAGAAGCACCCACAGGAATGAGATCTTTGGCAACATCTCTCTCATGGGCCTCTTTGGCCATGGGGTACTATCTCAGCTCAGTGATCGTATCCATAGTTAACAACTTCCTAGGCAGCTTAAACCACAGGCCATGGCTATCTGGTAGGAAATTGAATCACTATCATCTTGAAAGATTCTACTGGCTGATGTGTGTGCTAACTGGACTGAATTTCTTGCACTATCTCTTCTGGGCCTGTCGGTATAAATACAGATCCACAGGAGCTACCAAGTACCAAGTGACAAACTACCAAAGTACATAA 1758 0.4704 MEEGNQQHRWEGYVDWRGRPALRGRHGGMLAASFVLGVEILENLAFLSNASNLVRYLSDYMHFSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTPYHIYLISAVIEFLGLIVLTIQARSPSLKPLECKKGTADTSCQVLSGGKAGMLFVGLYLVALGVGGIKGSLPAHGAEQLDESTPQGRKQRSTFFNYFVFCLSCGALIAVTLVVWVEDNKGWEWGFGIATISIFASIPVFLGGSATYRNKIPSGSPLTTIFKVLIAATLNRSPSNAVASMATSPSYPTQNSKEPEEENGKAIVPAQTPTESLGFLNRAVVNKPVYKAVECTVQQVEEVKIVIKILPIFACTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPIFPVLFMMTLAPIYDHFIIPFARKVTKTEMGISHLQRIGIGLVFSIIAMAVAALVEVKRKRVASNLGLIDSTEQLPITFFWIAFQYLFLGSADLFTLAGLMEFFFTEAPTGMRSLATSLSWASLAMGYYLSSVIVSIVNNFLGSLNHRPWLSGRKLNHYHLERFYWLMCVLTGLNFLHYLFWACRYKYRSTGATKYQVTNYQST* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0967 585 SUPERFAMILY MFS general substrate transporter 43 570 IPR036259 -
Vvi1g0967 585 MobiDBLite consensus disorder prediction 272 286 - -
Vvi1g0967 585 Pfam POT family 101 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi1g0967 585 Gene3D MFS general substrate transporter like domains 1 575 IPR036259 -
Vvi1g0967 585 MobiDBLite consensus disorder prediction 272 295 - -
Vvi1g0967 585 CDD MFS_NPF4 29 566 - -
Vvi1g0967 585 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 27 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0967 Vvi-Chr1 10647726 10651666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0967 1 574 Organic Solute Cotransporters AT1G69850 72.232 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0967 - - vvi:100258696 1144.8