Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0959 ATGATCGCCGAAACCACACTTCGCTATACACAGCCGAAACGCAGCGTTTTCAAGCAAACCGAACTCAAGGGTTTTATCGAATTCTCCGTTCCGATGGATCCTGGGTCGTCGTCCTCGTCGTCCTCATCGTCGGCATTCCCTCTCCACATGGCGATGGCGGCGCTGGTCGGAGCATCGCTGATGGCTATCTCCGCCTTCTACGTTCACAAGCGCAGCGTCGATCAGGTTCTCCACCGCCTTATCGACATTCGCCGCGGAGGCCCTGCCAAGGCCGATGACCACGGCGGAGGAGAGCGAGGTGACTGCGACGACGCTGAGGCAGAGGTTGAGACTAATCGCAAAATGCGGGGACGGGGTCCATCTAGGTCTTTGGATAAGGCCGCACTTTGCTGTAGAAGAGTCTCGTCTTCCTTGCCCAATGCCGTTTTGGACAGTTCTTGGTTCGATGAAGAATCTAATTTTGATCCTCCAAAGCCTTTCTCCGTCCAAGATTTTTCCTCTTGTCACTTTGATAAACTCAACTCCATTCCCTCTGGACTGCCACCGCTTCAAACGGCTCCAAAAGACGAAGAGCATCTCTCTGCTAGCCACTCTGGTTCCAATGTGAGGGTGGCACCTGTTAGTAGGCTAATGACTCCAAGATCTTTGGGAGGCAATGCATTTGACAGTGCAGGGGATTCCGATGAGGAAGGAACGGAACTTGTAATTGGAGAGGACACTTTTTTCAACTATGCAGACACTAATCATTCAGTTGATTTTATGGGTATTAATGATTTAAATTCAAACATTCAGAATTCAACTCTCCTTCCCTTTAAAGTTGATAATGGCAACTGTTTTGAAGATCAGAAATGCAGAGGAACCAAAACTGAATCAAATGTTGGTGTGGATCTGCATGGCAATGGAAAGATGGACACAGCTTCAGGGAACATTTTGGGAACTAGGCCTATTTCTGCCAACACCATTTCACCACTGAGAACCATAGTGCAGGAATCAACAAATGTAGAAGAGGAGGAAGTACTGGAGATGATTCGTGGATGTTTAGATTTGCGGGATACCTACGTTTACAGGGAAAAAGTTGCTCCATGGGAGAAGGTAACAGAGCTAGGAAGTACTGCACTGGAGACAAGCAGTGATCCATTTCACTTTGACCTTGTTGAGACAACTACTCATCACTTCAGGATGGAAGATGGAGTTGTACATGTTTATGCGAGCAAAAATGACACTCTGGATCTTTTCCCTGTTGCAAGTTCAACAACATTTTTCACTGATATGCATCATATTCTAAGAATTATGGCTATTGGAAATGTTCGATCTTCATGTCATCATCGACTAAGATTTCTTGAGGAGAAATTCCGCCTTCATCTGTTAGTAAATGCAGATCGGGAGTTTCTGGCTCAGAAGAGTGCACCACATCGCGATTTCTACAACATTAGAAAGGTTGATACACATGTGCATCATTCTGCCTGCATGAACCAGAAGCACCTCCTGCGCTTCATCAAGTCTAAGCTCAGAAAAGAACCTGATGAGGTTGTCATATTCCGAGATGGGAAGTATCTCACACTTAGGGAAGTTTTTGAGAGTTTAGATTTGACAGGGCATGATCTGAATGTTGATCTATTGGATGTGCATGCTGACAAGAGTACCTTCCATAGATTTGACAAGTTCAATCTTAAGTATAATCCTTGCGGACAAAGCAGATTAAGAGAGATCTTCTTAAAGCAGGACAATCTTATCCAAGATGCAAGGACAGTTGTAATGCATAAAAAGAATTTGTTTTCTTCAACACGTCTAGGGCGTTTTCTAGCAGAATTAACAAAACAAGTTCTATTGGATCTTGAAGCAAGCAAATACCAGATGGCTGAGTATAGAGTGTCAATATATGGAAGGAAACAAAGCGAATGGGATCAGCTGGCGAGTTGGTTCATTAACAATTCAATTTACAGTGAGAATGCTGTTTGGTTAATCCAGCTACCACGGCTATATAATGTTTACAAGCAAATGGGGATTGTTACAAACTTTCAGAATATTTTAGATAATGTGTTTATTCCTTTATTCGAAGTAACAATTGATCCAAGTTCTCATCCGCAACTACATGTATTCCTAAAGCAGGTTGTGGGTTTCGACATTGTAGATGATGAAAGTAAACCAGAAAGGCGTCCAACTAAACACATGCCCACACCTGCCGAATGGACTAATGAATTCAATCCTGCATACTCTTACTATGCTTATTACTGCTATGCTAACTTGTACACTCTCAACAAGCTTCGTGAGTCAAAAGGACTGCCAACAATCAAATTCCGGCCACACTGTGGAGAGGCAGGTGATGTAGACCATTTGGCTGCTGCATTCCTTCTCTGCCATAACATTTCTCATGGGATTAATCTGCGGAAATCCCCTGTTTTGCAGTATCTCTATTATCTTGCTCAGGTTGGACTGGCTATGTCACCACTGAGCAATAATTCGCTTTTCCTGGATTATGGTCGCAATCCATTTCCAATGTTCTTCCAGCGTGGCCTAAATGTTTCACTCTCAAGTGATGATCCTCTGCAAATCCATTTGACAAAAGAAGCCCTTGTGGAAGAATATAGTGTTGCAGCACAGGTGTGGAAACTCAGTTCCTGTGATCTATGTGAGATAGCAAGGAACTCTGTCTATCAATCTGGATTCTCACATATGGCAAAGATGCATTGGCTTGGTAGAAAATACTTCATGAGAGGCCCTGAAGGAAATGATATTCACAAGACAAATCTACCCAGCACAAGGATTGCCTTCCGTCATGAGACATGGAAGGAGGAGATGATGTATGTCTACGCTGGAAAGGCTAAGTTTCCTGAAGAGATAGACCTTGTATAA 2853 0.4367 MIAETTLRYTQPKRSVFKQTELKGFIEFSVPMDPGSSSSSSSSSAFPLHMAMAALVGASLMAISAFYVHKRSVDQVLHRLIDIRRGGPAKADDHGGGERGDCDDAEAEVETNRKMRGRGPSRSLDKAALCCRRVSSSLPNAVLDSSWFDEESNFDPPKPFSVQDFSSCHFDKLNSIPSGLPPLQTAPKDEEHLSASHSGSNVRVAPVSRLMTPRSLGGNAFDSAGDSDEEGTELVIGEDTFFNYADTNHSVDFMGINDLNSNIQNSTLLPFKVDNGNCFEDQKCRGTKTESNVGVDLHGNGKMDTASGNILGTRPISANTISPLRTIVQESTNVEEEEVLEMIRGCLDLRDTYVYREKVAPWEKVTELGSTALETSSDPFHFDLVETTTHHFRMEDGVVHVYASKNDTLDLFPVASSTTFFTDMHHILRIMAIGNVRSSCHHRLRFLEEKFRLHLLVNADREFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYLTLREVFESLDLTGHDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQDARTVVMHKKNLFSSTRLGRFLAELTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNSIYSENAVWLIQLPRLYNVYKQMGIVTNFQNILDNVFIPLFEVTIDPSSHPQLHVFLKQVVGFDIVDDESKPERRPTKHMPTPAEWTNEFNPAYSYYAYYCYANLYTLNKLRESKGLPTIKFRPHCGEAGDVDHLAAAFLLCHNISHGINLRKSPVLQYLYYLAQVGLAMSPLSNNSLFLDYGRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAQVWKLSSCDLCEIARNSVYQSGFSHMAKMHWLGRKYFMRGPEGNDIHKTNLPSTRIAFRHETWKEEMMYVYAGKAKFPEEIDLV* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0959 950 Gene3D - 490 598 - -
Vvi1g0959 950 SUPERFAMILY Metallo-dependent hydrolases 327 937 IPR032466 -
Vvi1g0959 950 MobiDBLite consensus disorder prediction 179 201 - -
Vvi1g0959 950 FunFam Probable amp deaminase 586 932 - -
Vvi1g0959 950 PANTHER AMP DEAMINASE 319 941 IPR006329 GO:0003876|GO:0032264
Vvi1g0959 950 CDD AMPD 420 933 IPR006329 GO:0003876|GO:0032264
Vvi1g0959 950 ProSitePatterns Adenosine and AMP deaminase signature. 842 848 IPR006650 GO:0009168|GO:0019239
Vvi1g0959 950 Gene3D - 390 932 - -
Vvi1g0959 950 FunFam AMP deaminase 490 580 - -
Vvi1g0959 950 NCBIfam AMP deaminase 388 935 IPR006329 GO:0003876|GO:0032264
Vvi1g0959 950 Pfam AMP deaminase 383 936 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0959 Vvi-Chr1 10472215 10492671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0959 K01490 - vvi:100265525 1852.03