Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0953 ATGGAGGTCTTCAGCATTGCCAAAGCCGTCAGACTTCGAAGCCATCTGGACAGCTACCTGGTGGCTGACGACGACCAAGAGACGGTTCGCCAGAGCCGCAACGGCTCATCCCGTATAGCCAGATGGCTGGTCGAGGCCACCGGCCATGTCATCCGCCTCAAGAGCTGCCACGGCCGCTACCTTACCGCCTCACACGATCCATTTCTTCTGGGCGTGGCTGGGAAGAGGGTCACTCAGACTGTGCCCGGGACTGTATCAAACTCGTTGATTGAGTGGCAGCCTACATGGGATGGGTTCCAGGTGAAGTTGAGAGCTCGAAGTGGCCAATATCTGCGCGCAAACGGAGGGACGCCGCCGTGGAGAAACTCCATTACTCACGATCACCCCAGTGGCATTATGACACGAGACTGGGTTCTTTGGGACGTGGAAGCTGTGGAGGTGCCGGAGTGTGAGTCGGTTGTCGATTATCTTTCGGCGATTTCGGGGTTTCCTCCAATTTCTGACGACAGATCAACGATGGCGTGGCCCATCTCCATTCTCGCCTCCTTGTACTCTTCAAAGGTATCATCTATCTATCTTCTCTCTCCCGCCTCTTCCGTGTAG 603 0.5605 MEVFSIAKAVRLRSHLDSYLVADDDQETVRQSRNGSSRIARWLVEATGHVIRLKSCHGRYLTASHDPFLLGVAGKRVTQTVPGTVSNSLIEWQPTWDGFQVKLRARSGQYLRANGGTPPWRNSITHDHPSGIMTRDWVLWDVEAVEVPECESVVDYLSAISGFPPISDDRSTMAWPISILASLYSSKVSSIYLLSPASSV* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0953 200 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 148 - -
Vvi1g0953 200 FunFam BnaC05g19630D protein 5 143 - -
Vvi1g0953 200 Pfam Domain of unknown function (DUF569) 1 140 IPR007679 -
Vvi1g0953 200 SUPERFAMILY Actin-crosslinking proteins 6 146 IPR008999 -
Vvi1g0953 200 Gene3D - 9 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0953 Vvi-Chr1 10398353 10398955 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0953 - - vvi:100263972 407.527