Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0950 ATGGGGGAGGAAGTGAAAGTGGATAAATGGGGGTATGAGGTGAACACCTCCTCCGATGCTTGCATCTCTGCCATCAACGCTTACTACCACCAGCTGCTGATTTACGGGAGAGAGAGGTCCGTGATTCTGGAAGCGCCGCTTCGCGATCAACACTGCGTATTAGCCAACATATTGGCTGCTCATTTCCTCTGCTCCGCCGATCCTTCCCGTGCTCCGCTCCACATTCAGGCCGCCAAGTCTCGCCTCCAACAAGCCTCCGCATATGAGAAAGCGGTTTTCGATGCCGTCAGCTGTTTGATTTCCCAGGACAGGGATGATGATCTTGCTCTGGAGTTGCACTCTAAGTTATTAAAAGATTTTCCAAGAGATCTGGTATCTTTAAAGAGGGCTCAAGTGTTTTGCTTTTACATGGGTCGACCTGATCTATCTTTCAATCTTGTTCAACAGGTTCTACATGAAAACCAGAATGAAAATTACATTTATGGCATGCTTGCCTTTAGTTTATTAGAGTGTGGTCAAATGGTAGATGCTGAAAAAGCTGCAAAAAGGGGATTTGAGATCAACAAGCAAGATTGCTGGTCACAACATGCTTTGTGCCATGTTCTTCAATATGAGTGTCGTTTCAAAGAAGCAGTAGAGTTCATGGAAGAATGCTCATCCTCATGGAGTTTGTGTTCATCTTTCATGTTGACACACAACTGGTGGCATGTTTCTCTTTGTTACTTAGAAGGTCATTCCTCAATCAGAAAAGTCCTGGAGGTTTATGACAATTATATCTGGAAGGAGTTGGAAAGACCTGACGCTGCATCTGCAGAGGTGTACTTGAATGCTCTGGGATTGTTATTGCGGGTATATGTGCGAGGTCATGCTGTTGTCTTTGAGGACCGTCTGAAGACCTTAGTGAGCCGTTTGACAGATCAATCCACCTGGTATATAGAATGGCACCTTGATTTGCTGACAATATGGGCTTTGGCTAGCACTGGAGAATTGGTTAAAACAGAGGCTTTACTCCAGGGCTTGAAATCCAGGCTTTCTAGGATGAGCAAGAAGAAGCAACAAACCATGCAGAGAGGGATTCTGCTTGCAGAAGCCCTATACGAGTATGGTAGGGGTAACCACATACGAGCACTGGAATTGCTTGGTCCAGATTTTAATGCCAATCACTGTAAGATGATTGGGGCATCAGATGAACAGCTTGATGTTTTTAATGAACTTTGGTACAGCATGTTGCTGAGCACGGGACAAGCTACGAAGGCAATTGAAGTGATTGAAAAGCAGGTTAAGAATAGGGAAGGAGTCCCTTTCTTGTGGCGCCTGTTGGAGAGAGGTTACTCCATGACTGGCAAGCAGGAAGCGAGGGTTGCAGGCGAGAAAGCTATGGCTTTGGAGACTTCATATTTCAAATAG 1407 0.4542 MGEEVKVDKWGYEVNTSSDACISAINAYYHQLLIYGRERSVILEAPLRDQHCVLANILAAHFLCSADPSRAPLHIQAAKSRLQQASAYEKAVFDAVSCLISQDRDDDLALELHSKLLKDFPRDLVSLKRAQVFCFYMGRPDLSFNLVQQVLHENQNENYIYGMLAFSLLECGQMVDAEKAAKRGFEINKQDCWSQHALCHVLQYECRFKEAVEFMEECSSSWSLCSSFMLTHNWWHVSLCYLEGHSSIRKVLEVYDNYIWKELERPDAASAEVYLNALGLLLRVYVRGHAVVFEDRLKTLVSRLTDQSTWYIEWHLDLLTIWALASTGELVKTEALLQGLKSRLSRMSKKKQQTMQRGILLAEALYEYGRGNHIRALELLGPDFNANHCKMIGASDEQLDVFNELWYSMLLSTGQATKAIEVIEKQVKNREGVPFLWRLLERGYSMTGKQEARVAGEKAMALETSYFK* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0950 468 CDD StaR_like 49 407 IPR033891 -
Vvi1g0950 468 Gene3D Tetratricopeptide repeat domain 48 284 IPR011990 GO:0005515
Vvi1g0950 468 SUPERFAMILY TPR-like 104 225 IPR011990 GO:0005515
Vvi1g0950 468 Coils Coil 330 357 - -
Vvi1g0950 468 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 6 458 IPR033891 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0950 - - vvi:100262208 927.161