Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0939 ATGAAGAGGGTCAAGAACCATCCCACCCATGTAAACCCCAAATGGATAATGCTCATATCCACCTGCTCCATTCTCTCGCTCATCGTCCTCTTCTTCACCACCCTCGTTTCACCTGATTCGATACCTTTCCTCACTCTCCATCGCTCCGGCTCTGCTTCCCTCTTTGTGGAGTATAAGCTCCGACCCATTTCGCCCACACCAGTCTCTCTCCCTCCGCGCCTTGCCTACCTGATCTCCGGCACCGTCGGCGACTGTGGAGCTCTCAAGCGGACACTCCAAGCTCTCTACCATCCCCACAACCTCTACATCATTCACTTGGACCTCGAATCCCCACAAATTGAACGCTCTCATCTTCGCGATTATATTCGTAACCACCCGGCTTTTTCGTCCGTCAAAAACGTGTGGATGATGGAGAAGGCCAATCTGGTGACTTACCGTGGTCCGACCATGGTGGCGAATACGCTTCATGCCGCGGCCATTCTGTTAAAGGAAGGAGGCGAGTGGGATTGGTTTATTAATCTCAGCGCTTCTGATTACCCACTCGTAACTCAAGATGATTTGCTGCACACCTTTTCGTATTTGCCGCGGGATCTCAACTTCGTCGATCATACGAGTAACATTGGGTGGAAGGAATTTCAAAGGGCAAAGCCTATAATTGTTGATCCTGGGTTGTATATGACAAAGAAGAATAATGTTTTCTGGGTGAAACAGAGGCGAAGTGTCCCCACGGCCTTCAAGCTCTTTACAGGTTCTGCTTGGGTGGCACTTTCTCGGCCTTTCATAGACTACTGCATATGGGGCTGGGACAACCTTCCCCGAACTGTCCTAATGTATTACACAAACTTTGTCTCTTCCCCAGAAGGCTACTTCCATACTGTCATCTGTAATGCCGAAGAGTTTCGGAATACCACCGTCAATAGCGACCTGCATTTCATTTCATGGGATAACCCCCCAAAGCAGCATCCCCACCTGCTCACCATCACTGACATGTCCAAGATGATTAGTAGCAATGCTCCATTTGCCAGAAAGTTCCGAAGAGATGATCCAGTTCTTGATAAGATAGATGCTGAGCTTCTGTCCCGGAGACCAGACATGCTTGTGCCGGGTGCCTGGTGCATTGGAAGCAGCTCAAATGGAACTGACCCTTGCTCGGTTGTGGGCAATCCTTCAGTCCTCAAGCCGGGCCCTGGAGCAAAAAGGTTGGAAAATCTTTTAGTCTCTCTCCTCTCCAAACAGAATTTCCGGCCAAGGCAGTGCAAGTAA 1263 0.498 MKRVKNHPTHVNPKWIMLISTCSILSLIVLFFTTLVSPDSIPFLTLHRSGSASLFVEYKLRPISPTPVSLPPRLAYLISGTVGDCGALKRTLQALYHPHNLYIIHLDLESPQIERSHLRDYIRNHPAFSSVKNVWMMEKANLVTYRGPTMVANTLHAAAILLKEGGEWDWFINLSASDYPLVTQDDLLHTFSYLPRDLNFVDHTSNIGWKEFQRAKPIIVDPGLYMTKKNNVFWVKQRRSVPTAFKLFTGSAWVALSRPFIDYCIWGWDNLPRTVLMYYTNFVSSPEGYFHTVICNAEEFRNTTVNSDLHFISWDNPPKQHPHLLTITDMSKMISSNAPFARKFRRDDPVLDKIDAELLSRRPDMLVPGAWCIGSSSNGTDPCSVVGNPSVLKPGPGAKRLENLLVSLLSKQNFRPRQCK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0939 420 PANTHER GLYCOSYLTRANSFERASE 14 419 IPR044610 GO:0015020
Vvi1g0939 420 Pfam Core-2/I-Branching enzyme 74 333 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0939 Vvi-Chr1 10281464 10283541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0939 3 420 Glycosyltransferase AT5G15050 66.511 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0939 K20891 - vvi:100255369 874.004