Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0934 ATGCGTAAAAGCGTGTATGCTAATTATTCAGCCTTTATACGCACATCCAAGGAAATTTCAGATCTTGAAGGAGAGCTTCTTTCCATGAGAAATCTTTTATCAACTCAGGCAGCTCTAGTTCATGGTTTGGCTGAAGGAGTTGGGGTTGATTCCTTGTCTGCTGATTCCGATAGTTCAACAAAAGAGGACACATCTGATGTTACACATAGGGAACCTACTGACATGGAAAAATGGTTAATAGACTTTGTGGAGAATCTTGATGTTTTATTAGCTGAAAGGAGAGTGGATGAATCATTGACCGTCTTGGATGAAGGGGAAAGAACAGCACAAGAAGCTAGTAATAGGCAAACATTGAGCCCATCTGTTTTCTTATATCTGCAGGCTGCTATTAAAGAAGGAAGACAGAAGTTGGCTGATCAGCTTGCACATGTTGCCTGCCAAACTTCTACCTCTGGTCTTGAGCTTCGTTCAACTGTTCAAGCCCTAAAGAAACTGGGGGATGGCCCTCATGCTCATAAATTGCTGCTTAATTCTCACCATCATAATTTGGTGAACAATATGCGTATTCGCCCATCAAGCACTTCATATGGAGGAGCATTTACTGCTGCTCTTTCACATCATGTCTTCTCAATCATTGCCCAGGCAGCAAATGATTCCTTGTCAGTTTTTGGTGATGAGCCAGCATATGCATCTGAGCTTGTGACTTGGGCTGTCAAGGAGACCAAGACTTTTGCTCTTCTGGTAAAGAGACATGTTCTAGCCACTTCGGCAGCTGCAGGCGGTCTAAGACTTGCTGCAGAATGCGTTCAAACATGCTTGGGTCACTGTTCCTTGTTAGAAGCTCGCGGATTAGCCCTTTCTCCTATTCTATTGAAACTCTTCAGGCCTTGTATAGAAGAGGCACTGACTACCAACTTAAAAAGAATTGAACAGAGCAGCTCTGCTCTAGCTGTTGTAGATGATTGGACACTTGTCTTACCACCAGCTGGTATACGCCCTCTTGGTGCATGGACATCATCTCTTGGTAGTGCGATTGCATCACAGCTGAAGCTTTCAACCAGTGCTCACAGATTCAATTCAATGGTTCAGGAATTCTTTGAGGAGGTAGGGCCCCTTGAGAGCTTGCAGTTGGGTGGTTCCACATTGGAAGGTCTTTTACAAGTTTTCAACTCCTACATCAATTTGCTGATACATGCACTGCCAGGTACAATGGAAACTGAGGATAATCTTGGTGGCTCTGGGCATAAAATTGTTCGAATGGCAGAGACTGAATCTCAACAACTAGCTCTGCTGGCAAATGCATCAATGCTAGCAGATGAACTGCTTCCACGTGGTGCTATGAAGCTTTCACCCTTGCACCAGACTGGTAGAATGGACACCCCTGGAAGAGTTTCAGACAGGCAAAACCGATTCCCGGAGCATAGAGAATGGAAGAGGAAGCTTCAACGTGCTGTTGATCGATTGCGAGATAGCTTCTGCCGACAACACGCTCTTGAACTCATCTTCACGGAAGATGGTGAAATCCGTTTGACTGCAGAGATCTATACAAGCATGGATGGAAGTACAAATGAGCCTGAATGGTTCCCATCTCCAATATTTCAGGAATTTTTTGCAAAATTGACCCAAATAGCAAGCATTGCAACGGATATGTTTGTGGGAAGGGAAAGGTTTGCAACTATTCTACTGATGAGACTCACAGAGACAGTGATCTTGTGGCTTTCTGATGATCAAAGCTTTTGGGGAGAGATTGAGGCTGGGCCAAAGCCTTTGAGCACTTTTGGACTTCAACAGTTTTATTTGGATATGGAGTTTGTGATACTCTTTTCATCCCAAGGTCGTTACTTATCTCGTCATCTGCATCAAGTTATCAAAAACATCATAGCTAGAGCCATTGATGCATTTGCTGCTGCAACTGGAACAGACCCATATAGTGTGCTGCCAGAGGATCAATGGTTTGCTGAGGTTGCTCAAATAGCTATGAAGATGCTGACTGGAGAAGCCAACTTTGGAAATGTAGATCATGATGCAACCAGTCCCACTGCATCAATCTTATCTCATGGGAGTACCTAG 2070 0.4406 MRKSVYANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLAEGVGVDSLSADSDSSTKEDTSDVTHREPTDMEKWLIDFVENLDVLLAERRVDESLTVLDEGERTAQEASNRQTLSPSVFLYLQAAIKEGRQKLADQLAHVACQTSTSGLELRSTVQALKKLGDGPHAHKLLLNSHHHNLVNNMRIRPSSTSYGGAFTAALSHHVFSIIAQAANDSLSVFGDEPAYASELVTWAVKETKTFALLVKRHVLATSAAAGGLRLAAECVQTCLGHCSLLEARGLALSPILLKLFRPCIEEALTTNLKRIEQSSSALAVVDDWTLVLPPAGIRPLGAWTSSLGSAIASQLKLSTSAHRFNSMVQEFFEEVGPLESLQLGGSTLEGLLQVFNSYINLLIHALPGTMETEDNLGGSGHKIVRMAETESQQLALLANASMLADELLPRGAMKLSPLHQTGRMDTPGRVSDRQNRFPEHREWKRKLQRAVDRLRDSFCRQHALELIFTEDGEIRLTAEIYTSMDGSTNEPEWFPSPIFQEFFAKLTQIASIATDMFVGRERFATILLMRLTETVILWLSDDQSFWGEIEAGPKPLSTFGLQQFYLDMEFVILFSSQGRYLSRHLHQVIKNIIARAIDAFAAATGTDPYSVLPEDQWFAEVAQIAMKMLTGEANFGNVDHDATSPTASILSHGST* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0934 689 FunFam Exocyst complex component EXO84B 66 189 - -
Vvi1g0934 689 FunFam Exocyst complex component EXO84B 197 301 - -
Vvi1g0934 689 SUPERFAMILY Cullin repeat-like 70 302 IPR016159 -
Vvi1g0934 689 PANTHER EXOCYST COMPLEX COMPONENT 8 1 683 IPR033961 GO:0000145|GO:0006887
Vvi1g0934 689 MobiDBLite consensus disorder prediction 51 70 - -
Vvi1g0934 689 MobiDBLite consensus disorder prediction 451 471 - -
Vvi1g0934 689 Gene3D - 69 189 IPR042561 -
Vvi1g0934 689 Pfam Exocyst component 84 C-terminal 77 286 IPR032403 -
Vvi1g0934 689 Gene3D - 198 300 IPR042560 -
Vvi1g0934 689 Pfam Vps51/Vps67 1 38 - -
Vvi1g0934 689 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0934 Vvi-Chr1 10246455 10249942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0934 K19986 - vvi:100265642 1323.92