Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0932 ATGGCTGTAACTACCTTTCCAACTGTGGACCAGTGTCAATCCATTGGCCGAGAAAAGCACACTGTGGTTGCGGACATGGATGGAACCTTGCTTATTGGCAGGAGCTCCTTTCCTTACTTTGCTTTGGTGGCTTTTGAGGGGGGAGGTGTTCTAAGGCTGCTCTTCCTGCTCTTGGCTTCACCACTCGCTGGACTTCTTTACTATTTTGTGTCGGAGTCTGCAGGAATCCAGATTCTCATCTTTGTAACCTTCGCTGGGATGAAGGTGTCAGACATTGAGTCAGTTGCACGTGCTGTGCTGCCCAAATTTTATTTGAGCGATCTCCATCCCGAGTCATGGCGGGTGTTCTCATCATGTGGAAAGCGTTGTGTTCTTACCGCAAACCCCAGGATAATGGTTGAGGCATTTCTGAAAGATTTTTTGGGAGCTGATTTAGTTTTGGGGACTGAGATAGCCACTTATAAGGGTAGGGCAACTGGGTTTGTTTGTGATCCAGGTGTACTTGTGGGCAAGAACAAGGCATATGCTCTCAACAAGACTTTTGGAGAGACCCAGCCTGAGATTGGGCTGGGTGATCGTCACACTGATTTTCCCTTCATGGCTTCATGCAAGGAGGGCTATATTGTGGCAGCCAAACCAGAGGTTAAGGCGGTAACAAGTGACAAGCTTCCCAAGCCCATCATCTTCCACGACAGCCGCCTCGTCCAAAAGCCAACTCCTCTCACGGCACTCCTCACCCTTCTCTGGATCCCCATAGGCTTCGCACTCGCATGCTTGCGAATCGCCGCTGGCTCACTCCTCCCCATGCGCATTGTCTACCACGCTTTCTGGGCACTGGGTGTCCGAGTCTCCGTCAAGGGTTCCCCACCTCCTGTTGCCAAAAAGTCAATAGGCCAGTCAGGCGTGCTATTCATCTGCTCCCACCGAACCCTCCTTGACCCAATATTCCTCTCCGCAGCGCTCGGCCGTCCCATTCCTGCAGTCACGTACTCCGTCTCCCGCCTCTCCGAGTTCATCTCCCCTATCAAAACCATTCGCCTAAGCCGAGATCGAGTCAAAGACGCAGCCATGATAAAGAAACTGCTTGAAGAAGGTGACCTAGCTATTTGCCCCGAAGGAACCACTTGCCGTGAGCCTTTCCTTCTCAGGTTCTCAGCATTGTTTGCTGAACTGACTGACCAGCTTGTTCCAGTGGCTATGATGAACCGCATGAGCATGTTCCATGGAACAACAGCAAGAGGGTGGAAAGGGATGGACCCATTTTTCTTCTTCATGAATCCAAGCCCAGCGTATGAGGTAACGTTCTTGAACAAGCTGCCCCTGGAACTTACTTGCAGTTCGGGGAAATCTAGCCATGAGGTGGCCAACTACATGCAGAGGGTGATTGCTGCCACTCTTTCCTATGAATGCACTAGCTTTACCAGGAAAGATAAGTACCGAGCACTCGCTGGAAATGATGGGACCGTGCCCAAAAAACCTCTGCTATATCCCGACAAAGTCATGGGATGCTGA 1512 0.5106 MAVTTFPTVDQCQSIGREKHTVVADMDGTLLIGRSSFPYFALVAFEGGGVLRLLFLLLASPLAGLLYYFVSESAGIQILIFVTFAGMKVSDIESVARAVLPKFYLSDLHPESWRVFSSCGKRCVLTANPRIMVEAFLKDFLGADLVLGTEIATYKGRATGFVCDPGVLVGKNKAYALNKTFGETQPEIGLGDRHTDFPFMASCKEGYIVAAKPEVKAVTSDKLPKPIIFHDSRLVQKPTPLTALLTLLWIPIGFALACLRIAAGSLLPMRIVYHAFWALGVRVSVKGSPPPVAKKSIGQSGVLFICSHRTLLDPIFLSAALGRPIPAVTYSVSRLSEFISPIKTIRLSRDRVKDAAMIKKLLEEGDLAICPEGTTCREPFLLRFSALFAELTDQLVPVAMMNRMSMFHGTTARGWKGMDPFFFFMNPSPAYEVTFLNKLPLELTCSSGKSSHEVANYMQRVIAATLSYECTSFTRKDKYRALAGNDGTVPKKPLLYPDKVMGC* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0932 503 Gene3D - 115 223 IPR023214 -
Vvi1g0932 503 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 215 489 - -
Vvi1g0932 503 SMART plsc_2 302 403 IPR002123 GO:0016746
Vvi1g0932 503 Pfam haloacid dehalogenase-like hydrolase 22 200 - -
Vvi1g0932 503 CDD LPLAT 279 463 - -
Vvi1g0932 503 Pfam Acyltransferase 299 395 IPR002123 GO:0016746
Vvi1g0932 503 FunFam Glycerol-3-phosphate 2-O-acyltransferase 6 119 223 - -
Vvi1g0932 503 SUPERFAMILY HAD-like 19 218 IPR036412 -
Vvi1g0932 503 PANTHER ANCIENT UBIQUITOUS PROTEIN 20 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0932 Vvi-Chr1 10214817 10216764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0932 6 492 Acyl Lipid Metabolism Gene Families AT2G38110 55.397 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0932 - - vvi:100243321 971.844