Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0931 ATGGGGTGTCGGCTACTATGGATTATTGTAGCGTTCACTCTCATATCGATGGGAGAAAGCAAGAAAAGTACAGGTGAATCGTGCCATCCTGATGACCTGATGGGTCTAATCAGTTTCAAGGCTGGAATTCGGATTGATACTTCAGGTCGGTTGGAGAGGTGGGTTGGCCGCAGTTGCTGCAAATGGGAGGGCATTTCCTGTGATAATACAACTGGGAGGGTGACACAACTCCTCCTCCCAGGGTTCATCTCCACAGATGTTTCTATCCTCCAAACTCAGATGAAAGGCTCACTATCTCCAAAGATAACACTTCTCACCTCTCTTCAAGTAATTGATCTCAGTGAACTCAGTTTCATTACTGGAAACATTCCAACTTCAATTGGTTTTCACCTCCCAAACCTCCGAAAACTCTATCTCCTTCGCAACAAGCTGAGTGGCCCAATTCCAGAAAGCATTGGTAAGTTGTCCAAACTTGAGGAAATCATACTAAGTGAGAATCGCTTCTCTGGGTCTCTCCCTTTGAGCCTTGGGAATCTGAAGAATCTCAATAGACTTCTATTGGATTCAAACCAATTTTCTGGTGCAATACCTGATTCTCTTGTAAACTTGACAATTTTGGTTGTTTTAGATCTTCATCACAACTATTTGAACGGTCATATGCCAGCCAAAATTGGTGAACTGCAGGTCCTGGAACAGCTTGATCTTTCGGAGAATCTCTTAAGCGGGAAAATTCCAGTTTCATTAACTAATATCACTACTGTTCAAGATATTGACTTGAGTAACAACTCCCTTGAGGGAGAGATCCCATTCCCCTCCTGCTCTGGCCAAATGCCCTTCCTCCGCTTTCTAGCCCTCCATCACAACCATCTGACTGGAAGGATACCCCCAGCTTTGGGATATCTGGTCTCCCTACAGAGATTATACCTAGAAAATAACAAGCTCAATGGGCCAATACCTTCCAGTTTGGGTAATCTCTCAGATTTGAGGGAGTTGTACCTCAGTGGCAACCGGTTATCAGGCCTAATACCAATAGCATTCAGTCGACTCTCTCAGCTTATCAACTTAAACCTTTCAAACAATTTGATTCGAGGGTTGCCTCATGAGATGTCTTCCCTCCAGAATCTTCAAACCCTCACTTTGTCATTCAACCCTTTAAACTTCTCCTCCATCCCCAAGTGGATGGCAGAATTACCATCAATTTCCCAGATTTACATGGCAGGATGTGGACTCCAAGGTGAAATTCCAGAATTTTTGCAGAGAAAACCAATACAGGAGCTGGACTTATCAGCCAACCATCTTACAGGAAGCATCCCATCATGGCTTGGTGGCCTGAGTCAGCTCTACTTGTTAAATCTCTCCAAGAATGCACTAGTTTCAGAGATTCCTGATTCAATCACAAGGTTGCATGAGTTGGGTGTACTTGATCTCCACTCTAACAAGCTAACAGGCTCCATAATTGAGGTGTTCAAGATGGGAAGCATTTTACCTGGTGGATCACTGAGGTACATCGATCTTTCTCATAACAGTTTCTCAAGTGGAATTGAGCAGATCGGTGCAGGAGAACAACATGGGATTGAGTTTCTCAATTTATCTCATAACTTTCTCAAAGGTAGATTGCCAACTTCCATAGGAAGATTGGAACTGATGCGAAGTTTGGATTTGAGCCACAATGAATTGGGTTTCAACTTGCCAGAGTCTCTGGGGAATGTGAAATCATTGGAGAGGCTGAAGCTGGAGAAAAACCGGTTTACAGGGAAGATACCAGATGGGTATTTGATGTTGAGAAAGCTGAAAGAGTTGGATTTGTCAGATAACCTTCTGGTGGGACAAATTCCTAATGGTAAGCCCCTGGATGACTTCCCAAGGAGCTCCTATTCTGGAAACAGAGCTTTATGCGGTAGGCCCCTTGCTCCTTGTAAGCCTTGA 1926 0.4398 MGCRLLWIIVAFTLISMGESKKSTGESCHPDDLMGLISFKAGIRIDTSGRLERWVGRSCCKWEGISCDNTTGRVTQLLLPGFISTDVSILQTQMKGSLSPKITLLTSLQVIDLSELSFITGNIPTSIGFHLPNLRKLYLLRNKLSGPIPESIGKLSKLEEIILSENRFSGSLPLSLGNLKNLNRLLLDSNQFSGAIPDSLVNLTILVVLDLHHNYLNGHMPAKIGELQVLEQLDLSENLLSGKIPVSLTNITTVQDIDLSNNSLEGEIPFPSCSGQMPFLRFLALHHNHLTGRIPPALGYLVSLQRLYLENNKLNGPIPSSLGNLSDLRELYLSGNRLSGLIPIAFSRLSQLINLNLSNNLIRGLPHEMSSLQNLQTLTLSFNPLNFSSIPKWMAELPSISQIYMAGCGLQGEIPEFLQRKPIQELDLSANHLTGSIPSWLGGLSQLYLLNLSKNALVSEIPDSITRLHELGVLDLHSNKLTGSIIEVFKMGSILPGGSLRYIDLSHNSFSSGIEQIGAGEQHGIEFLNLSHNFLKGRLPTSIGRLELMRSLDLSHNELGFNLPESLGNVKSLERLKLEKNRFTGKIPDGYLMLRKLKELDLSDNLLVGQIPNGKPLDDFPRSSYSGNRALCGRPLAPCKP* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0931 641 PANTHER OS10G0469600 PROTEIN 185 269 - -
Vvi1g0931 641 FunFam Nuclear pore complex protein NUP107 29 197 - -
Vvi1g0931 641 SUPERFAMILY L domain-like 423 639 - -
Vvi1g0931 641 Gene3D Ribonuclease Inhibitor 272 363 IPR032675 -
Vvi1g0931 641 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 365 641 - -
Vvi1g0931 641 ProSiteProfiles Leucine-rich repeat profile. 327 348 IPR001611 GO:0005515
Vvi1g0931 641 Pfam Leucine Rich Repeat 303 325 IPR001611 GO:0005515
Vvi1g0931 641 FunFam Leucine-rich repeat receptor protein kinase EMS1 198 270 - -
Vvi1g0931 641 SUPERFAMILY L domain-like 27 289 - -
Vvi1g0931 641 SUPERFAMILY L domain-like 196 486 - -
Vvi1g0931 641 Gene3D Ribonuclease Inhibitor 364 641 IPR032675 -
Vvi1g0931 641 PRINTS Leucine-rich repeat signature 230 243 - -
Vvi1g0931 641 PRINTS Leucine-rich repeat signature 594 607 - -
Vvi1g0931 641 ProSiteProfiles Leucine-rich repeat profile. 351 372 IPR001611 GO:0005515
Vvi1g0931 641 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Vvi1g0931 641 FunFam Piriformospora indica-insensitive protein 2 271 364 - -
Vvi1g0931 641 Gene3D Ribonuclease Inhibitor 31 199 IPR032675 -
Vvi1g0931 641 Gene3D Ribonuclease Inhibitor 202 271 IPR032675 -
Vvi1g0931 641 SMART LRR_typ_2 325 348 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 372 397 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 203 227 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 277 301 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 349 371 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 594 616 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 546 570 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 131 155 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 444 468 IPR003591 -
Vvi1g0931 641 SMART LRR_typ_2 179 202 IPR003591 -
Vvi1g0931 641 Pfam Leucine rich repeat 328 385 IPR001611 GO:0005515
Vvi1g0931 641 Pfam Leucine rich repeat 424 481 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0931 27 639 Receptor kinase-like Gene Family AT4G08850 31.982 5.18e-84 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0931 - - vvi:104879912 1221.45