Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0930 ATGGGTGCTTGTGTTTCGTCCCCAGAATCGTGTGTGGGAGGAAAGCTCAAGTATCCAAAGAACAAGTTTCGGAAGAGGAGGAAAATCAAGAGACGTGCGGTGTCTCGCTTCGCCGATGTAACATCATTTGACAAGGCTGACAGGCCAAGTAGGCCTGGACCACCGCCGGATCGATCCTTCACCAACCCCACTTTCCGTGCGGGAAGTCTTGATGAGGCATGGTTTGATTCTATTCCAGTTTTTGAGTCTGACTGTGAAGAAGAGTTTGAAAGTGTTCAAGAAGAGGTTTTTTCTGTCAATGGCTTTGAAGGTGCTTCAGTATCAAGTATTTCATCTCTCAGAGATAGTAGTCTTTGGGACTGTAATGTCAACGTCCAACATACCTCTGGCATGGATGGTGTTGATTCTCAACTGAAACCTGATGGGCCTTCTAATGAGGCAAAGCAACCTGTGTTCCTTGATGAAATCTCCTTGACCGCGGATGAAAGTGGTGGCAGAGAGGAAGGAATGCTGGAAAATTGTGGCATTCTTCCAAACAATTGTTTGCCTTGTCTTGCTTCCACTGCGTCCTCCGAGGAAAAGAGAGGATCACTAAGCTCTAGTCCTCCAAGTTCACGGAAAAAGGGTGCCTTAAAAATTTCCTTCAAATGGAGGGAGGGAAATGCTAATGCCTCTTTACTTTCTTCAAGGATGCTTCTGCAGAGGCCAATAGCAGGATCCCAAGTACCTTTTTGTCCGATAGAGAAGAAAATGCTTGACTCTTGGTCAAATATTGAGCCAAGCACTTTTAAAGTTAGAGGAGAGAACTATTTCAGGGATAAAAGGAAGGATTTTGCTCCAAATTATGCTGCATATTATCCATTTGGTGTTGATGTCTTTTTATGTCCTCAGAAAATTAGTCACATTGCTCAGTTTGTGGAACTCCCTACTGTTAATTCTTCTGGGAAATTCCCACCAATTCTAGTTGTAAATGTTCAGATTCCATTGTATCCTGCCACAATTTTTCAGAGTGAAACGGATGGAGAAGGAATGAGTGTTGTTTTGTATTTTAAACTTTCAGAAAGTTACTCTAAGGAACTTCCCTCCTGCTTTCAAGAAAATATCGGGAGGTTAATTGATGATGAGATGGAGAAAGTCAAAGGTTTTCCTGTAGATGCAATTGTACCCTTCCGAGAAAGGTTGAAGGTATTGGGCCGTGTGGTAAATGTGGAAGATCTTCATTTAAGTGGTGCAGAGCGGAAGCTTATGCAGGCATACAATGAAAAACCATTCCTTTCACGCCCTCAACATGAGTTCTATTCGGGAGAAAACTATTTTGAGATTGACTTGGATATGCACAGATTTAGTTACATCTCTAGGAAAGGATTTGAAGCATTCCAGGATAGATTAAAGATCTGTGTCTTAGATCTTGGTCTAACAATTCAGGGGAACAAAGTCGAGGAGTTGCCAGAGCAGATTCTATGTTGTATCCGGTTAAATGGAATTGAGCACATAAATTACCACCAACTGGGGTTGGGTCAAGAACCCCTTTGA 1533 0.4253 MGACVSSPESCVGGKLKYPKNKFRKRRKIKRRAVSRFADVTSFDKADRPSRPGPPPDRSFTNPTFRAGSLDEAWFDSIPVFESDCEEEFESVQEEVFSVNGFEGASVSSISSLRDSSLWDCNVNVQHTSGMDGVDSQLKPDGPSNEAKQPVFLDEISLTADESGGREEGMLENCGILPNNCLPCLASTASSEEKRGSLSSSPPSSRKKGALKISFKWREGNANASLLSSRMLLQRPIAGSQVPFCPIEKKMLDSWSNIEPSTFKVRGENYFRDKRKDFAPNYAAYYPFGVDVFLCPQKISHIAQFVELPTVNSSGKFPPILVVNVQIPLYPATIFQSETDGEGMSVVLYFKLSESYSKELPSCFQENIGRLIDDEMEKVKGFPVDAIVPFRERLKVLGRVVNVEDLHLSGAERKLMQAYNEKPFLSRPQHEFYSGENYFEIDLDMHRFSYISRKGFEAFQDRLKICVLDLGLTIQGNKVEELPEQILCCIRLNGIEHINYHQLGLGQEPL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0930 510 MobiDBLite consensus disorder prediction 40 63 - -
Vvi1g0930 510 PANTHER CW14 PROTEIN 1 505 - -
Vvi1g0930 510 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 255 495 IPR009769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0930 Vvi-Chr1 10190018 10197710 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0930 - - vvi:100260447 985.326