Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0915 ATGGGTAGTTATGAAGACGACAAGCTGACACTTGTCCCATCTTTGCCCTCACTCATCGCCACCCAACCGGAAAGTTCAATACACGCGTTGCAACGAGGTGGTACAAATTCAGCCCCATCATTCCAGCGAAGAGAAAGGACTGGGAAAAGGTTGGGAGAAAAAAGAAAGGAAAAAAGTGTAAGGGTGAGCGGCAGCCATAAACGCGTCCTCTCACTCTCTCTGACACGTTTGACAAACCACACTTTAGATATCCAGGACCATATCACCATGAAACTAGCGAAAACCCCCCTCTGTCGGCACCAGATCTACTCCGACTCCTCAGCTTCCTCTCAAAACTTCCCCTCCAAATTCTCTGTACTTTACCTTAAGCTTCCGTTCCACCAATTCATGGACTCTGAACAGCGCCGCAAGCGCAAACGCAGTCTCAGAGCTTCGCCTTCCCCTCACTCACACTGCGGGTTCTCGGCTAGATCTCTCATCTTATGTCTCTCCTTTATTTTCCTTCTCTTGTTGCTGCATCGGTTCCCAATCGGCACGGCGTCGTTTCGTCCAGTTGTGATAGTTTCTACTCTCTCGCTCTTGTCTTCATCCACCAGCAATTCTATCCGCGATTATGTTAGCAGTAGATTATTGTTACCGTTGAGAGTAGAGGACCGAGTCCTGTTTCCCGATCATGTTTTGCTGATGGTTTCCCACATTAACGATAGAAGTGAGGTGCTGGAGTGTGTTTACTGCAAGGATATTGGAGTGGAGGCGGCGAATAAATTAATTGTTAGGCCTGTGTTGTCCGTGGATGAACTGGATGAGCTCAGATGGGTTGCGAGGTGTCCCCTTCCGCCCCAGAATTACTCTGCTGAGGTTAATCTGCGTAGACCGCCAAGGAAAGAGAGCATCGTGGATGGAGATGAGTGGCTGCGGAGGGTTCATCCCACAGTTCATTCGTGGGAGATGATGGCATATGCGGCAGCTTTGGATCGAGATTCCGCGGTTGTGTTTGTCAAGGGATTGAACCTAAGGCCGGATAGGGAATCAGATCCCAGGCAATTCAGTTGCCATTTTGGAACGGGTGATCGGGAGAGGGGTGGAAAATTTGCGCTCACTACTAGGGCGTTTTCAGCTGCACAGGAGGTTATTAGGTGTTCTTTGCCTAGGAGCATTAGGATGAACCCGAGTAAGGCTCATGGGATTAGGGTTACTGTAGGCTTGAATTCTCATTTCCATGCCAATGCCAGAGCTTCTAATCATGTTCTAGTACCTTCTGTGGCTAAGATGTCAAGTCCCAAGTCATACAATTCCTACAAGCATAAGAAAAATCAGGGGAAGTATCAGCTTTGCGTGTGCACCATGGTATGGAACCAAGCTTCTTCATTACGGGAGTGGATTATGTACCATGCCTGGCTTGGTGTTGAGCGCTGGTTCATCTATGATAATAACAGTGATGATAGAACTAAGGAGGTGATTCAAGAGCTTGAATTAGAAGATTACAATGTCACCAGGCACACCTGGCCATGGATTAAAACACAAGAAGCTGGTTTCTCGCACTGTGCTCTCAGAGCAAGAGATGAATGCAATTGGGTGGGATTCATGGATGTCGATGAGTTCTTCTATTTCCCATTTCCAACCCACCGCCGAGGATCCAATAAACTGATTTTTCGTGGTCAGAATTCATTGCGTACATTGGTTGCAAATTTTTCTTCAACAACCATTGGGGAGATCAGAACAGCTTGCCACAGCTATGGGCCATCTGGGTTGAATTCCCTCCCTTCTCAAGGGGTAACTGTAGGGTACACTTGCAGGCTACAGAGCCCTGAGCGGCACAAGTCTATTGTGCGCCCAGATGTGCTTGACAGAACTCTTCTCAATGTGGTGCACCACTTTCGGCTGAGAAAGGGATTCAAGTACCTGAATTTGCCTCAAAGCACAGGAGTGATAAACCATTATAAGTATCAGGTGTGGGAGGCTTTTAGAGCAAAGTTCTTCAGAAGGGTTGCGACCTATGTTGCAGATTGGCAAGAGAAGGAGAATGAAGGGTCAAAGGATAGAGCGCCTGGTTTGGGGACAGAAGCCATTGAACCACCCAAGTGGCCACTACAGTTTTGCGAAGTTTGGGACACTGGTTTGAGGGACTTTGTTTTGGCTAACTTGGCTGATCCTACCACTGGGTTGCTGCCCTGGGAAAGGTCTCTTCTCTAA 2193 0.4797 MGSYEDDKLTLVPSLPSLIATQPESSIHALQRGGTNSAPSFQRRERTGKRLGEKRKEKSVRVSGSHKRVLSLSLTRLTNHTLDIQDHITMKLAKTPLCRHQIYSDSSASSQNFPSKFSVLYLKLPFHQFMDSEQRRKRKRSLRASPSPHSHCGFSARSLILCLSFIFLLLLLHRFPIGTASFRPVVIVSTLSLLSSSTSNSIRDYVSSRLLLPLRVEDRVLFPDHVLLMVSHINDRSEVLECVYCKDIGVEAANKLIVRPVLSVDELDELRWVARCPLPPQNYSAEVNLRRPPRKESIVDGDEWLRRVHPTVHSWEMMAYAAALDRDSAVVFVKGLNLRPDRESDPRQFSCHFGTGDRERGGKFALTTRAFSAAQEVIRCSLPRSIRMNPSKAHGIRVTVGLNSHFHANARASNHVLVPSVAKMSSPKSYNSYKHKKNQGKYQLCVCTMVWNQASSLREWIMYHAWLGVERWFIYDNNSDDRTKEVIQELELEDYNVTRHTWPWIKTQEAGFSHCALRARDECNWVGFMDVDEFFYFPFPTHRRGSNKLIFRGQNSLRTLVANFSSTTIGEIRTACHSYGPSGLNSLPSQGVTVGYTCRLQSPERHKSIVRPDVLDRTLLNVVHHFRLRKGFKYLNLPQSTGVINHYKYQVWEAFRAKFFRRVATYVADWQEKENEGSKDRAPGLGTEAIEPPKWPLQFCEVWDTGLRDFVLANLADPTTGLLPWERSLL* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0915 730 MobiDBLite consensus disorder prediction 26 63 - -
Vvi1g0915 730 Pfam Glycosyltransferase family 92 442 681 IPR008166 -
Vvi1g0915 730 MobiDBLite consensus disorder prediction 26 42 - -
Vvi1g0915 730 PANTHER UNCHARACTERIZED 160 719 - -
Vvi1g0915 730 SUPERFAMILY Nucleotide-diphospho-sugar transferases 444 535 IPR029044 -
Vvi1g0915 730 MobiDBLite consensus disorder prediction 43 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0915 Vvi-Chr1 9994638 9996830 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0915 - - vvi:100258721 1453.73