Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0914 ATGTCTCTCTCAAAGAAAACCGTCTCAACTCGTGATCTGAAGCACCGAGTCATCACCTGCCTCAACAAGCTCTCCGACCGGGACACCCTCGCTGTCGGGACGGCCGAGCTCGAATCCATCGCTCGGAATCTCACGCACGATTCCTTCTCTCCCTTCCTCTCATGCCTCTATGGTACCGATTCCTCCGAGAAATCGCCTGTAAGGAAGCAATGCGTTCGTCTCTTAGGTGTGCTCTCGGAGACTCACGGCGACTCTCTCTCTCCTCACCTCTCCAAAATGCTATCCAACGTCGTTCGTCGCCTTCGTGACTCCGATTCCGCCGTCCGATTGGCCTGCGTTGACGCCGTCGGTGTTATGTCGTCGCAGATCACGAAACCACCATTTTCCGCATTTTTGAAGCCCTTGACTGATTCAATATTGCTTGAGCAAGATTATAATTTGCAAATCGGTTCCGCGCTTTGCATTGCGGCAGCGATCGAGGCCGCGCCCGATCCAGAGCCGGAGCAGCTGCTGAAGCTCCTGCCGAGGCTACTGAAGTTAGCAAAGAGCGAGAGCTTCAGAGCGAAGCCGGCATTGTTGTCGCTCATCGGTAGCATTATTGGTGCCGGTGGGGCGTCCACTCGTGGTGTGTTGAATAGTCTGGTTCCGTGCTTGGTTGAGTTTTTGAGTAGTGAGGACTGGGCAGCGAGGAAGGCTTCGGCGGAGGCGTTGGCTAGATTAGCTCTCGTGGAGAGAGATTTGGCAACCGAGTTCAAGTCCTCGTCTTTGTCTTCTTTGGAGAGTCGGAGATTTGATAAGGTCAAGGTGGTCAGGGACACTATGAATCGCACCTTGGATTTGTGGAAGGAGCTTCCATGTGACTCCAACGGTCTCTTGCCCCTGTCTCCATCTAAAGCTTCTTCAAAAGATAATGGTGCTGGTGGATGCTTCCCTCCTGCCTCCAAAATTTCCTGTGATGTTGGTTTTGAGACTCCTCAGCCAAAGAAAATAATCCCCACAAGATCACCTCCATCAGATAATTCATTAGTAACCACTGCGAGAAAGAGAAGCCCTTTACAGAGTAGTAATAATGGGAAATCGACTACTGCAATGTTCCGTAAGCTAGACTGCAAGAAACCCTCTGATTGGAAAGTTGAAGTTGCTGTTCCCCATCCATCCTCTTCAAAAGTGGCTTGTGAAGATGATCTTAAAAGGAGGTACTTGGTAGTTTCAGATTCGGAGGAGAATGGAAACTGCGGGGATTCAAGACCAGAAACAAACCGTGTCCTCTTTAGTAAGATCAGTAATGAAAAAATGCATAAATTTGGTTGCTTGAGATCTGGGTCTCGCATTGTCCCCTTTCATGAGAATAATAATTCTGAGTCAGCTGTCGTGGATAGCAATGCTACTGAAGAAGAAATCTATGAAAACCAAAAGGACATAGAGGATCTGTCTTTGATTCGCAAACAGCTTATCCAGATTGAGAACCAGCAATCCAGTATGTTAAATCTCCTCCAGAGGTTTATTGGCAACTCCCAAAGTGGGATAAACTCTCTGGAGACCCGTGTAAATGGCCTGGAGATGGTACTGGAGGAAATATCATTTGATTTGGCAATATCAAGTGGAAGGGTATCAAACTCTGATTCTGCAGGGAACACATGTTGCAAGCTGCCCGGAGCAGAATTCTTGAGTTCTAAGTTTTGGAAGAGAACAGAAGGCCATACGACTTCAAGATTCTCTTCTACTGGCAGCATCCAAGCATTAACTACCATAAATAATATGCCCAATAAATATGCCAGCAATATGGTAGATGAACAAAAGCTTCAGCACCAAAATTTGGATGGATTTGTTGCAAATCCATTAGCTGATATTCATGGCACTTCAAGAACTCTAATTGATGGGGCATCTCCAGCTACTCAAACAATGCCAGTGAACCTTAGCCGCAGATTAGCTGCATAG 1938 0.4737 MSLSKKTVSTRDLKHRVITCLNKLSDRDTLAVGTAELESIARNLTHDSFSPFLSCLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSKMLSNVVRRLRDSDSAVRLACVDAVGVMSSQITKPPFSAFLKPLTDSILLEQDYNLQIGSALCIAAAIEAAPDPEPEQLLKLLPRLLKLAKSESFRAKPALLSLIGSIIGAGGASTRGVLNSLVPCLVEFLSSEDWAARKASAEALARLALVERDLATEFKSSSLSSLESRRFDKVKVVRDTMNRTLDLWKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKKIIPTRSPPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDDLKRRYLVVSDSEENGNCGDSRPETNRVLFSKISNEKMHKFGCLRSGSRIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFIGNSQSGINSLETRVNGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWKRTEGHTTSRFSSTGSIQALTTINNMPNKYASNMVDEQKLQHQNLDGFVANPLADIHGTSRTLIDGASPATQTMPVNLSRRLAA* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0914 645 Gene3D - 6 306 IPR011989 -
Vvi1g0914 645 MobiDBLite consensus disorder prediction 333 363 - -
Vvi1g0914 645 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 10 615 IPR033337 GO:0005874|GO:0008017
Vvi1g0914 645 Pfam HEAT repeat 214 241 IPR000357 GO:0005515
Vvi1g0914 645 FunFam TORTIFOLIA1-like protein 3 isoform A 4 359 - -
Vvi1g0914 645 SUPERFAMILY ARM repeat 33 271 IPR016024 -
Vvi1g0914 645 MobiDBLite consensus disorder prediction 325 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0914 Vvi-Chr1 9979055 9983035 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0914 - - vvi:100260313 1192.18