Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0911 ATGGCTCTGTCGACATCTTTTCGTTCCAATCTCATCAAACCCCTTACCGCCCTCACCGCCTTATCGTCCACCCAGCATCTCCGCCGTCCCTTTTCCTCCTCCGCCGACGACAGCACCGTCCTCACCATCGAGACCAGCGTCCCCTTCGTCGGCCACAAATGCGAGCCACCCTCGCGCAATGTCGAAACCACTCCCAAAGAACTGCTCGGATTCTTCCACGATATGGCGTTGATGCGGCGGATGGAGATTGCTTCCGACTCCCTCTATAAATCCAAGCTGATCCGCGGTTTCTGCCACCTCTACGATGGACAAGAAGCGGTGGCCGTTGGTATGGAGGCCGCAATTACCAAAAAGGATTGCATCATCACAGCCTATCGCGACCACTGCATCTACCTCGGCCGCGGCGGAACCCTAGTCGAGTGCTTCTCCGAGCTCATGGGCCGTCAGGCCGGATCTTCCAAGGGGAAAGGTGGCTCCATGCATTTCTACAAGAAGGACAGCGGTTTCTATGGCGGCCACGGTATCGTCGGAGCTCAAGTTCCTCTTGGTTGCGGGTTGGCCTTTGCGCAGAAGTACTCCAAGGACGAGACTGTGACATTCGCGATGTACGGTGATGGAGCAGCGAATCAGGGGCAGTTGTTCGAGGCACTTAATATAGCGGCGCTTTTGGATTTGCCAGCGATTTTGGTTTGCGAGAACAATCACTATGGGATGGGTACGGCTGAGTGGAGAGCAGCCAAGAGTCCAGCATATTACAAGCGCGGGGACTATGTTCCTGGTTTGAAGGTAGATGGTATGGATGCTCTTGCGGTGAAACAGGCATGCAGATTTGCTAAGGAGCATGCTTTAAAAAATGGACCCATTATTCTTGAAATGGACACTTATAGGTACCATGGTCACTCCATGTCTGATCCTGGGAGCACCTACCGTACACGTGATGAGATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAAAGAATAAGAAAGCTGATCTTATCTCATGAGCTGTCCACTGAAGCAGAGTTAAAGAGTATTGAGAAGAAAATCAGAAGTGAAGTAGATGATGCTATTGCACAAGCCAAGGAAAGTTCAATGCCGGAGCCTTCTGAACTCTTCACCAATGTATATGTGAAAGGTTTTGGGATTGAGGTGGCAGGAGCAGATAGGAAAGAAGTTAGAGGGGTGCTTCCATGA 1197 0.5146 MALSTSFRSNLIKPLTALTALSSTQHLRRPFSSSADDSTVLTIETSVPFVGHKCEPPSRNVETTPKELLGFFHDMALMRRMEIASDSLYKSKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRDHCIYLGRGGTLVECFSELMGRQAGSSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFAQKYSKDETVTFAMYGDGAANQGQLFEALNIAALLDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDALAVKQACRFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILSHELSTEAELKSIEKKIRSEVDDAIAQAKESSMPEPSELFTNVYVKGFGIEVAGADRKEVRGVLP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0911 398 MobiDBLite consensus disorder prediction 301 320 - -
Vvi1g0911 398 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 66 378 IPR017597 GO:0004739|GO:0006086|GO:0043231
Vvi1g0911 398 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 34 381 - -
Vvi1g0911 398 Gene3D - 29 393 - -
Vvi1g0911 398 FunFam Pyruvate dehydrogenase E1 component subunit alpha 31 391 - -
Vvi1g0911 398 Pfam Dehydrogenase E1 component 74 369 IPR001017 GO:0016624
Vvi1g0911 398 CDD TPP_E1_PDC_ADC_BCADC 71 361 - -
Vvi1g0911 398 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 58 379 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0911 Vvi-Chr1 9913656 9925038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0911 1 398 Acyl Lipid Metabolism Gene Families AT1G24180 77.500 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0911 K00161 - vvi:100263880 799.275