Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0910 ATGCTGGGCTTTGGATTAAACCCCGTCCATCTGGCGGTTCTTGCTTTTATTCTTTTCTCCCCCGTGTGTCTCGGGATTCGTTCTTTTCCGGGGAGAGATGTCGCCGGCGGTGATTATGGGTACGAGGGTTTCTTCCGATTTGCAGAAGCGCCGGACTATCGTAACGGAGAGGAGTGTCCGGCGAAGGGCCATAAAGGGTATGTGTCGTCGTGTGATCCGTCACTGGTTCACATCGCCATGACTCTTGACTCGGAGTACCTGAGAGGATCCATTGCAGCGGTCCATTCCATTCTGCGCCACTCTTCTTGCCCAGAGAACGTCTTCTTCCATTTCATCGCCGCCGAGTTCGACCCGGCGAGTCCGCGAGTGCTGACTCAACTCGTCCGATCTACGTTTCCTTCTCTCAACTTCAAGGTCTACATCTTCAGAGAGGACACTGTAATCAATCTCATCTCCTCTTCCATTCGCTCAGCGCTCGAGAACCCATTGAACTACGCTAGAAACTACTTGGGCGATATTCTCGATCCGTGCGTGGAGCGAGTCATTTACATTGACTCGGATCTTGTAGTTGTTGATGACATTCGCAAGCTCTGGAACATCACACTCACTGAGTCGCGAGTCATTGGTGCGCCAGAGTATTGCCATGCCGTCTTTGAAAAGTACTTCACCGATGAGTTCTGGTCCGACTCGGTTCTGCCAAGGGTCTTTGATTCGAGAAAACCTTGTTATTTCAATACGGGTGTGATGGTGATGGATTTGGTGAGATGGAGAAAGGGCAATTACAGGAGGAAGATCGAGAATTGGATGGAATTGCAGAGGAGGAGGAGGATCTACGAACTGGGTTCGCTTCCGCCATTCTTGCTAGTGTTCGCCGGGAATGTTGAGGCCATTGATCACCGGTGGAACCAGCACGGTCTTGGCGGGGACAACGTGAAGGGAAGTTGCAGGCCACTCCACCCAGGCCCTGTGAGTCTGCTGCATTGGAGCGGTAAAGGAAAGCCATGGTCGAGGCTGGACGCGAGAAAGCCCTGCCCTGTGGATCATCTTTGGGAGCCCTACGATCTATACAAACCCCATAGGAACCACAGATTGAATCATCAACAGATGCTCCTTTCCGCTTCTTCGTCAACATTGGTTGGATTGATTAGAAGAAATTGGTTGAGCACTGTGGTGGGAGGAGATTATTCTTTTGTTGAATTCTTTTGTTAA 1209 0.5087 MLGFGLNPVHLAVLAFILFSPVCLGIRSFPGRDVAGGDYGYEGFFRFAEAPDYRNGEECPAKGHKGYVSSCDPSLVHIAMTLDSEYLRGSIAAVHSILRHSSCPENVFFHFIAAEFDPASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIRSALENPLNYARNYLGDILDPCVERVIYIDSDLVVVDDIRKLWNITLTESRVIGAPEYCHAVFEKYFTDEFWSDSVLPRVFDSRKPCYFNTGVMVMDLVRWRKGNYRRKIENWMELQRRRRIYELGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRPLHPGPVSLLHWSGKGKPWSRLDARKPCPVDHLWEPYDLYKPHRNHRLNHQQMLLSASSSTLVGLIRRNWLSTVVGGDYSFVEFFC* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0910 402 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 77 346 IPR029044 -
Vvi1g0910 402 SUPERFAMILY Nucleotide-diphospho-sugar transferases 76 357 IPR029044 -
Vvi1g0910 402 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 14 360 - -
Vvi1g0910 402 FunFam Hexosyltransferase 77 344 - -
Vvi1g0910 402 Pfam Glycosyl transferase family 8 77 337 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0910 Vvi-Chr1 9902602 9903910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0910 2 379 Glycosyltransferase AT1G70090 72.324 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0910 - - vvi:100241606 797.349