Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0908 ATGGGGGAATCAATAGTGGGGGCTCTAAAAGACGAAAACAAGATGGGGGAGTCGGCTGCTTCTGATGATGTTCTTGAAGCGTCAGTGTCGTTTGGTAGGTTTGAGAATGATTCATCTCTATCCTGGGAGAAATGGTCTTCATTCTCCCCGAACAAGTACTTGGAAGAAGTTGAGAAGTGTTCGACGCCTGGATCTGTAGCTCAGAAAAAGGCCTACTTTGAAGCCCATTACAAGAAGATTGCTGCTCGGAAGGCTGAGTTACTGGATCTGGAGAAGCAAATGGGAACGGACCCCTTGGGATCAGATGATCCTAATTGTGGAGATCAGATCAGAAATACTGATGGGAATAATACTGAGTTTGATGTATCTAATGGTCAGAGTTCTGCAGAAGGAGTTGACCAAGACACCAACTTGATCAGTGTGGTGACTACCACCCATGTGGATGAGCCCAGTGAGTCAAATGAGGGTGCTCCAATCACCATAGAATGCCAAAGCTCATCAGTTGAGGAGGCTGAAGAAGAGTTGGATAGCAAACAAGGTACCCCCAAATTGAAGGATGGGGAAGAAACTGTTTCGATAAAGGAAGAGGCTTCTCCAATGGGGTCTCAGAATGTAATGGAACTTCCCCCAAGCTTGGACAATGGGACAGGGAACACTCCAAGGATTAAGAAGGAAAGACCAAAATTGGATCCACCAAAGGAAACTAAAAAGATTACTTTGGCAAATAAGGAGAGGAAAACAGCATCAGTAATGAAGAAAGCAGTATCGCCTATAGCCAAGTCGCCACAAATTTCCAAACCTAGAGATTCAAAGCCAACACCAACTTCCAAAATGATATCTTCATCACAGCCATCAATAAAGAAGGCAAATGGATCATCTTTACCAAAGAACAAGAATCCTTCTGCAGGAGAAATCAAGAAACCATCTCCAAGGAGCAAGATTCCCTCTGCAGGGGAATGGAAGAAAGTAGCTCCTACTTCCCTGCACAAGTCCCTTAGTCTGGGTCCCCCACATTCTGATTCAGCATCCTTAACAACGACCAGAAAATCACTCATTATGGAGAAAATGGGGGATAAGGACATTGTTAGACGAGCCTTTAAGACATTTCAGAATAGTTTCAACCAATTGAAACCTTCTAGTGAAGTTAGATCTTCTGTACCAAAGCAGGTGTCTGCAAAGAGCACAGAACCAAGGGTTTCCACTTCTATAACTACACAAAGAGATAAGGAAAGGCCGCTCAAAGCTGGTGTTGTGGATCAAAAAAACACTAAGACTGCCCCAACTTTTGGCTTGAGAAGTAATGAAAGAGCAGAGAAACGGAAAGAGTTTTTCAAAAAATTGGAGGAAAAATCTAATGCTAAACAGACAGAGAAAACACGCCTTCAATCAAAATCAAAGGAGCAAAAGGAGGTAGAGATCAAAAAGCTAAGACAGAGCCTTAATTTCAAGGCAACACCTATGCCAGGATTTTATCAGGGACAGAGGACATCAAAAAGCAATTTGAATAAGGTTGCCAAGCATGGTTCATCATTGGCCTGA 1539 0.4308 MGESIVGALKDENKMGESAASDDVLEASVSFGRFENDSSLSWEKWSSFSPNKYLEEVEKCSTPGSVAQKKAYFEAHYKKIAARKAELLDLEKQMGTDPLGSDDPNCGDQIRNTDGNNTEFDVSNGQSSAEGVDQDTNLISVVTTTHVDEPSESNEGAPITIECQSSSVEEAEEELDSKQGTPKLKDGEETVSIKEEASPMGSQNVMELPPSLDNGTGNTPRIKKERPKLDPPKETKKITLANKERKTASVMKKAVSPIAKSPQISKPRDSKPTPTSKMISSSQPSIKKANGSSLPKNKNPSAGEIKKPSPRSKIPSAGEWKKVAPTSLHKSLSLGPPHSDSASLTTTRKSLIMEKMGDKDIVRRAFKTFQNSFNQLKPSSEVRSSVPKQVSAKSTEPRVSTSITTQRDKERPLKAGVVDQKNTKTAPTFGLRSNERAEKRKEFFKKLEEKSNAKQTEKTRLQSKSKEQKEVEIKKLRQSLNFKATPMPGFYQGQRTSKSNLNKVAKHGSSLA* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0908 512 MobiDBLite consensus disorder prediction 377 402 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 94 347 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 377 471 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 1 20 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 171 193 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 403 417 - -
Vvi1g0908 512 Pfam Targeting protein for Xklp2 (TPX2) domain 429 499 IPR027329 -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 106 166 - -
Vvi1g0908 512 Coils Coil 444 464 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 219 250 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 490 512 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 196 218 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 484 512 - -
Vvi1g0908 512 Coils Coil 161 181 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 266 299 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 433 471 - -
Vvi1g0908 512 MobiDBLite consensus disorder prediction 332 347 - -
Vvi1g0908 512 PANTHER F3I6.9 PROTEIN 1 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0908 Vvi-Chr1 9883352 9887586 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0908 - - vvi:100258808 981.859