Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0905 ATGGAGTGTGCCGGAAGGGGAACGGGAAGGAGGTGCATTGGGCCCGCCACAAGACGCTGTGGTCGCTGCGGAGCCGTTGCTTATTGTTCCGTTTCTCACCAGGTTTCACACTGGAGTGATCATAAAGAAGAGTGTGGGAGGTTAGAGCAACAGATGAAGCTTGTGGATGTCTTAAATGATTTCCCCTTCACGTTCACTCCGGAGGCCACAATTCGGATTGTTGAGAAGCAGGAGAGTAGGTGTTCCTTCCTGAGCAACAGGGGTCTTCATCGGGTGGGAATGTGGATGTGTGAATGTCCTTGCGGCGATTCCCTTGTTTCTCTTGAGCATTCAAGGTTAAGTGATTGCTGGAATCTTTCAAGTACCTTGTGCCCATGTAGTGGGCCAGTATCTAGAATGTCAAAGTGTTTAACTAGTTGGAAGGACTATTATCAATGGAGGTGCATCCCTCTACATTCACCAGTTGCTTTGCTTCTTCACTGGCCACTTATGGTGTATCACGCTACTCAACTTGCTGCTATGAGAAACTTGAGTGCTGAAATCACTAATAAGTTGTGCATACATTATCTTGGGCCCGAGAAAGAGCTTCTTCAACTTGCTGTGTTTGGGGAGTTGCATGCACTTTTTCCCAGTGTGCAGGTGCATATAGAGTTAATTGGGCCTGCAATTCCAGAATCTAGGGATGGTGAGAGAGTTGATCTTTACACCTATGCTCATTGCATTGAGACAGATTGCATGTGCAAATCTTCAAGTGGGAATACCTGCTGGGATGTATGCTCTGGTAGAACTTCAGCAGTGACACTGAGGCTCCATAAAGGTTTTTATCATGAGCGGTTCCAAGATATAGTGAAGGATTCCATTCCTCATTTAGTCATTGCTCCAAATGCTGGAATTGCTGCCTATTCAAGTTGGTTACCAACCATTGAGTTGATAAAGGAACTAAATGTCCCAGCGGTTTTTTCTGATTACTGTGAAGAAGCTTCTCATCTGGCATCTTGTTGCATAAGCACCGTAACTGGCCACCCTATGACAATTCCTATTCAATTGAATCCATTCAGACAGCCAATGGTCATAGAAGATAGTGCTCTGTTTCTTCCATGTTACTCAAATTGCTTTCTATTTGGGATATGA 1131 0.45 MECAGRGTGRRCIGPATRRCGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDVLNDFPFTFTPEATIRIVEKQESRCSFLSNRGLHRVGMWMCECPCGDSLVSLEHSRLSDCWNLSSTLCPCSGPVSRMSKCLTSWKDYYQWRCIPLHSPVALLLHWPLMVYHATQLAAMRNLSAEITNKLCIHYLGPEKELLQLAVFGELHALFPSVQVHIELIGPAIPESRDGERVDLYTYAHCIETDCMCKSSSGNTCWDVCSGRTSAVTLRLHKGFYHERFQDIVKDSIPHLVIAPNAGIAAYSSWLPTIELIKELNVPAVFSDYCEEASHLASCCISTVTGHPMTIPIQLNPFRQPMVIEDSALFLPCYSNCFLFGI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0905 376 ProSiteProfiles Zinc finger MYND-type profile. 1 45 IPR002893 -
Vvi1g0905 376 Gene3D - 3 52 - -
Vvi1g0905 376 PANTHER ZINC ION BINDING PROTEIN 2 376 - -
Vvi1g0905 376 Pfam MSS51 C-terminal domain 162 357 IPR046824 -
Vvi1g0905 376 Pfam MYND finger 12 45 IPR002893 -
Vvi1g0905 376 SUPERFAMILY HIT/MYND zinc finger-like 11 51 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0905 K24081 - vvi:100251950 800.816