Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0904 ATGGATCTATATGTTTTTGCAACACCATATCGTGTTACGTGGGACTACTACTTTTCTGCTCGAGAGCATAAATTAGAAATTGAATCATGGGAAGAACCTGCAGAATTGGAATATGTAAAGCAGCATGGCATCTCTGTATTTCTCATGCCATCAGGGATGCTGGGGACCTTGCTTTCTTTAATAGACGTCTTACCTCTATTTTCTAACACGGCCTGGGGTCAGAGTGCCAACTTAGATTTTCTGAAGAATCACATGGGTGCAACATTTGAAAAACGTCCTCAGCCTTGGCGGGTAACCATCAATCCAGAGGATGTGCATTCTGGTGACTTTTTAGCAGTGTCAAAGATACGTGGTCGGTGGGGTGGATTTGAGACCTTAGAAAAATGGGTAACAGGTGCATTTGCTGGTCATACAGCAGTTTGCTTGAAGGATGAAGAGGGTAATCTTTGGGTTGGTGAGTCGGGGCACGAGAACGAAAAGGGAGAAGAAATTATAGTGGTAATGCCCTGGGATGAATGGTGGGAATTGTCACTTAAGGATAACTCTAACCCACAAATAGCTTTGCTTCCCTTACATCCAGACTTGCGTGCAAAATTTAATGCCACTGCAGCATGGGAGTATGCTCGGAGCATGGCAGGCAAGCCGTATGGTTATCACAATATGATATTCAGTTGGATTGATACTATAGCAGACAACTATCCACCTCCTCTTGATGCTCACTTGGTCATTTCTGTCATGTCTATGTGGACTAGAATGCAGCCAGCATATGCTGAAAATATGTGGAATGAAGCTCTAAATAAGAGGCTTGAGACCGAGGATTTGGACTTGCTTGGAATTCTTGCTGAAACAGAAAAGCGTGGCTTGACCTTTGATCAACTACTTACTATTCCAGAGCAAGATGAATGGGTATACAGTGATGGGAAATCGACAACATGTGTTGCCTTTATCCTGGAAATGTATAAAGAGGCAGGAATCTTTGGTCCCGCTTCTAGCTCTATTCAAGTAACTGAGTTCACTATTCGTGATGCATATATGCTTAAAATCTTTGAGAACAACCAATCACGTCTGCCAAGTTGGTGCGGCGATGAAGATGGTCGGCTCCAGTTCTGCCAGATCCTTGGTGAGTATCGGATGGAATTGCCCCAGTATAACACCATAGAACCATATGCTCACATGAATGAGAACTGCCCCTCCTTACCTCCAACTTATGAGAGGCCTGTGGGATGTTAA 1230 0.4382 MDLYVFATPYRVTWDYYFSAREHKLEIESWEEPAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTAWGQSANLDFLKNHMGATFEKRPQPWRVTINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEEGNLWVGESGHENEKGEEIIVVMPWDEWWELSLKDNSNPQIALLPLHPDLRAKFNATAAWEYARSMAGKPYGYHNMIFSWIDTIADNYPPPLDAHLVISVMSMWTRMQPAYAENMWNEALNKRLETEDLDLLGILAETEKRGLTFDQLLTIPEQDEWVYSDGKSTTCVAFILEMYKEAGIFGPASSSIQVTEFTIRDAYMLKIFENNQSRLPSWCGDEDGRLQFCQILGEYRMELPQYNTIEPYAHMNENCPSLPPTYERPVGC* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0904 409 Gene3D endopeptidase domain like (from Nostoc punctiforme) 104 233 - -
Vvi1g0904 409 PANTHER OS01G0793500 PROTEIN 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0904 Vvi-Chr1 9806659 9811205 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0904 - - vvi:100251867 863.603