Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0896 ATGTTTAAAGAGGTCACTTTTTCCTATAACATCTTGTCTGATCCAGACAAACGGCGTCAGTATGATACTGCAGGTTTTGAGGCTGTTGAGTCAGAAGGCCAAGAATTGGAGCTAGACCTTTCCAATTTGGGAGCTGTGAACACTATGTTTGCTGCTCTTTTTAGTAAACTTGGTGTACCAATCAAGACCACTGTATCAGCAACAGTCTTGGAGGATGCCCTGAATGGCGTGGTGACTGTTCGACCACTTACACTGGGGCAACCAGTGGTTAAGAAGGTAGAAAAGCAATGTGCTCATTTCTATTCTGTTACACTAACAGAGGAGGAAGCACAAACTGGATTTGTGTGTCGAGTCCAATCATCGGACAAAAGCAAGTTCAAGCTATTGTATTTTGATCAAGAGGAAGGTGGTGGACTAAACCTCTCACTACAGGAGGACAGTGCCAGAACAGGAAAGGTTACATCTGCTGGAATGTATTTTCTTGGTTTCCCTGTTTATCGGTTGGATCAAACAGTTAACTCGATGGCAGCTGCAAAGGATCCAGATTCTGCTTTCTTCAAAAGATTGGATGGGTTCCAACCTTGTGAAATGACTGAACTAAAGGCTGGTACCCATGTATTTGCTGTTTATGGTGACAATTTTTTCAAGAGTGTAAGCTACACAATAGAAGCACTTTGCACAGCTCCTTTTGCAGAAGAGAAGGAAAATCTTAGAGCTGTGGAAGCCCAAATACTAACAAAAAGGGTGGAACTCTCAAAATTTGAAACTGAATACCGAGAGGTCCTTACACAATTTACTGAGATGACCAGTAGATATGCACAAGAAATGCAAGCCATTGATGACCTTCTCAAGCAAAGGAATGAAATTCATGCCTCATACTCCAGTGCTCCACCAATAAAACGAAGTAGAAGCAAGAACAGGGGCCTTTCGAAAGATTCGAAAGATGACGGTCAGGTGAAAGATAAGAAACCTGCGTTCCGGGAAAGGCCAAAGAAAAAGAAATGGTACAACATCCACTTAAAGGTGGATAAGAGCAAGCCTTGCTGA 1047 0.425 MFKEVTFSYNILSDPDKRRQYDTAGFEAVESEGQELELDLSNLGAVNTMFAALFSKLGVPIKTTVSATVLEDALNGVVTVRPLTLGQPVVKKVEKQCAHFYSVTLTEEEAQTGFVCRVQSSDKSKFKLLYFDQEEGGGLNLSLQEDSARTGKVTSAGMYFLGFPVYRLDQTVNSMAAAKDPDSAFFKRLDGFQPCEMTELKAGTHVFAVYGDNFFKSVSYTIEALCTAPFAEEKENLRAVEAQILTKRVELSKFETEYREVLTQFTEMTSRYAQEMQAIDDLLKQRNEIHASYSSAPPIKRSRSKNRGLSKDSKDDGQVKDKKPAFRERPKKKKWYNIHLKVDKSKPC* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0896 348 MobiDBLite consensus disorder prediction 293 333 - -
Vvi1g0896 348 ProSitePatterns Nt-dnaJ domain signature. 2 21 IPR018253 -
Vvi1g0896 348 SUPERFAMILY Chaperone J-domain 1 34 IPR036869 -
Vvi1g0896 348 MobiDBLite consensus disorder prediction 305 325 - -
Vvi1g0896 348 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 347 - -
Vvi1g0896 348 Gene3D DnaJ domain 1 62 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0896 Vvi-Chr1 9698364 9708811 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0896 - - vvi:100256999 690.263