Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0893 ATGGGCATCTCAAGCCCATTCAAAGACCAAACCCACCCTTATACTCTCTTCAAGAAACTCTTGCCTTATGCCCTTTATGCTCTCTTTCCCATAGCTCTCCTTCGCTTGTACCTTCACCCTCCCTCCCTTCCTCAGTCTCCCATCGATCCGCTACCCAATGTCAATCCCATTATCTTCCCCTCTTCTTCTTCTTCTTTTTCTTCATCTCCTTCTCATGAAGAGGAAAGCGCCTACGAAATTCCATGCGACTACACAAATGGCAAATGGGTCCGTGACAAGTTGGGTCCTTTGTACAATGGCACGAGCTGTGGCACAATCAAGGATGGCCAGAACTGCATCAGCCATGGCAGGTCTGATTTGGGTTACCTCTATTGGAGGTGGAAGCCCGATAAATGCCAGCTTCCCAGGTTCGAACCAAAGACCTTTCTTCAAATTCTCCGGAACAAAAATTTAGCATTCGTGGGAGACTCCATGGCTAGGAACCAACTGGAGTCTCTTCTATGCATGCTTGCAACTGTTTCTACTCCTGATCTTGTTTATCGAGATGGTGAAGATAACAAGTTTCGTCGATGGCATTTCCCTTCTCACAACATCAGTGTATCAATCCACTGGTCACCTTTCCTTGTAAGAGGCATCGAAAAATCGAACTCTGGTCCCAATTACAACAAACTCTACTTAGATTACGTTGATGAGAGGTGGGCAGGGGATATGGATCGTATGGACATGATTGTCTTATCAATTGGGCACTGGTTCCTACACCCAGCTGTGTTCTACGAAGGGGATTCAGTACTAGGTTGCCATTACTGCCCTGGCCTCAATCACACTGAAGTAGGATTTTACGAAGTGTTTGGGAAGGCATTTAGGACTACACTGAAGACCATAGCTGAAAGACGAGGAGCTAACGGCAATCCGATTGATGTAATAGTGACTACATTTTCTCCCTCACATTTTGAAGGCGATTGGGACAAGGCGGGTGCTTGTCCCAAGACCAGGCCATTCAAGGAGGGTGAAAAACTGCTGGAAGGAATGGATGCCGACATGAGAAGAGTAGAGGTAGAAGAAGTGGAGGCGGCCAAGGCCAATACAGAGCAATTTCCTGGGTTCAGGGTTGAGGCTTTGGATGTCACCAAATTATCATTGATGAGACCGGACGGCCACCCGGGACCCTATATGCACCCCTTTCCATTCGCTAACGGGGTCAAGGACCGAGTCCAGAACGATTGTGTCCATTGGTGCTTGCCAGGGCCCGTAGACACTTGGAACCAGATATTACTAGAGGTGATGAAGAGATGGGATGATCAATCAAGGAGACAAGTCTGA 1320 0.4765 MGISSPFKDQTHPYTLFKKLLPYALYALFPIALLRLYLHPPSLPQSPIDPLPNVNPIIFPSSSSSFSSSPSHEEESAYEIPCDYTNGKWVRDKLGPLYNGTSCGTIKDGQNCISHGRSDLGYLYWRWKPDKCQLPRFEPKTFLQILRNKNLAFVGDSMARNQLESLLCMLATVSTPDLVYRDGEDNKFRRWHFPSHNISVSIHWSPFLVRGIEKSNSGPNYNKLYLDYVDERWAGDMDRMDMIVLSIGHWFLHPAVFYEGDSVLGCHYCPGLNHTEVGFYEVFGKAFRTTLKTIAERRGANGNPIDVIVTTFSPSHFEGDWDKAGACPKTRPFKEGEKLLEGMDADMRRVEVEEVEAAKANTEQFPGFRVEALDVTKLSLMRPDGHPGPYMHPFPFANGVKDRVQNDCVHWCLPGPVDTWNQILLEVMKRWDDQSRRQV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0893 439 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 134 426 IPR026057 GO:0016740
Vvi1g0893 439 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 55 425 IPR029962 GO:0016413
Vvi1g0893 439 Pfam PMR5 N terminal Domain 82 133 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0893 Vvi-Chr1 9655841 9657254 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0893 K23877 - vvi:100241586 898.271