Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0891 ATGGACGCCAGCAGTGGAGATGAATTCGCGGTGGGTTGCATCCTCTCCATCAAAACCTCCCTGGGAGACGAATTTGAAGGCCAAATCATCACCTACGATCGACCCTCCAACATCCTCGTCCTTCAAGAGGGTTCGGACTCTGGACCACGCCGGAATATAAGGCTGCTAAAGGCTAACTATATAAAGGAGTTCTCTTACTTGGGTCAAGCTGAAGACCCTCTTGATCCCAAGAAGTGCTGTATTGATCTTAATGCACTCCAAGCTAGGGAAGAAGTAGCCATAAGACAAGCGGAGGCAGATGCTGAGAGGATAGGAGTGGGCGTTACTGTTGAGGCCCAGAACATTTTTGATGCACTTTCTAAGACACTTCCAGTGCGCTGGGACAAGACTGCCATAGTTGTGATGAATGAAGTCCGTGTCAGTAGTCCGTATCTCCCTGAATCTGTTAGTGGAGGAACTCCTGCTGCCAATGAGCGGGTGAAGAAAGTGCTTGAGTTTGAAAGGAAGAGGTTGCAAGCTCGTGTTGCTGGGCAGTGA 537 0.4953 MDASSGDEFAVGCILSIKTSLGDEFEGQIITYDRPSNILVLQEGSDSGPRRNIRLLKANYIKEFSYLGQAEDPLDPKKCCIDLNALQAREEVAIRQAEADAERIGVGVTVEAQNIFDALSKTLPVRWDKTAIVVMNEVRVSSPYLPESVSGGTPAANERVKKVLEFERKRLQARVAGQ* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0891 178 PANTHER LSM12 HOMOLOG 5 176 IPR039683 -
Vvi1g0891 178 Pfam Anticodon-binding domain 81 163 IPR019181 -
Vvi1g0891 178 ProSiteProfiles AD domain profile. 79 172 IPR047574 -
Vvi1g0891 178 SMART AD_2 77 163 IPR019181 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0891 K23643 - vvi:100267269 349.362