Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0890 ATGCTTGGCACAACAGTTCTGATTCCAAGCTCTCTTGTTCCCCAGATGGGTGGAGGAAATGAGGAGAAAGCAAAGGTTATTCAGACATTACTATTCGTGGCTGGCTTGAACACATTGTGTCAAACTTTGTTTGGGACCCGATTGCCTGCAGTTATTGGAGGCTCTTTCTCCTTCGTGCCAACAACAATTTCAATTGTTTTGGCTGGTCGATACAGTGACATTGTGAATCCTCAGGAGAGATTTGAAAAGATAATGCGAGGAATTCAGGGTGCTCTTATTGTTGCTTCAACACTTCAAATAGTCATTGGCTTCAGTGGCCTTTGGCGCAATGTGACAAGGTTCTTAAGTCCTCTGTCTGCAGTCCCTTTGGTAGCTCTGTCTGGCTTTGGGCTCTATGAGTTGGGCTTTCCTGTGCTTGCAAGATGCATAGAGATTGGACTGCCACAGCTCATTGCGCTAGTAATTTTTTCACAGTATATTCCCCATATAATACGGTCGGAAAAACATGTTTTCGACCGCTTTGCTGTTATATTCTCGGTGGTGCTCGTGTGGATTTATGCTCATCTACTCACTGTTGGTGGAGCCTATAAGAACACGGGAACAAAAACTCAAGCAAGCTGCCGAACTGATCGGGCCGGAATTATAGGTGCTGCTCCATGGATAAGGGTTCCATATCCATTTCAATGGGGAGCTCCCACATTTGATGCTGGAGAAGCTTTTGCTATGATGGCTGCTTCATTTGTTGCTCTTGTAGAGTCAACTGGTGGCTTCATTGCCGTGTCAAGGTATGCCAGTGCAACTCCGATGCCACCTACAATTCTTAGCCGAGGTGTTGGTTGGCAGGGAGTGGGCATTTTGTTCTCTGGGATATTTGGAACTGGAACTGGATCATCCGTATCTGTTGAAAATGCTGGTCTGTTAGCTCTTACACGTGTTGGAAGCCGAAGGGTTGTGCAGATATCTGCTGGATTCATGATCTTCTTTTCCATACTTGGAAAGTTCGGAGCTGTTTTTGCTTCAATCCCACCACCGATCATTGCTGCTTTGTATTGCCTTTTCTTTGCCTATGTTGGTGCAGCAGGTCTCAGCTTCCTTCAGTTTTGCAATTTAAATAGCTTTAAAACAAAGTTCGTTCTAGGCTTCTCTATTTTCATGGGCTTATCAATCCCACAGTACTTCAATGAATACAGAGTAGTCAATGGTTATGGTCCTGTGCATACTGGAGCAAGATGGTTCAACGATATGATCAATGTGCCATTCTCATCAGAAGCATTTGTAGCGGGGTTGTTGGCTCTCTTCCTGGACAGCACACTGCACCGGAAAGACAATACAACTAGGAAGGACAGAGGCATGATTTGGTGGGAGAAATTCCGGTCATTCAAGACAGATTCAAGAAGCGAGGAGTTCTATTCTCTTCCCTTCAATCTTAACAAGTTTTTCCCATCAGTGTGA 1452 0.4483 MLGTTVLIPSSLVPQMGGGNEEKAKVIQTLLFVAGLNTLCQTLFGTRLPAVIGGSFSFVPTTISIVLAGRYSDIVNPQERFEKIMRGIQGALIVASTLQIVIGFSGLWRNVTRFLSPLSAVPLVALSGFGLYELGFPVLARCIEIGLPQLIALVIFSQYIPHIIRSEKHVFDRFAVIFSVVLVWIYAHLLTVGGAYKNTGTKTQASCRTDRAGIIGAAPWIRVPYPFQWGAPTFDAGEAFAMMAASFVALVESTGGFIAVSRYASATPMPPTILSRGVGWQGVGILFSGIFGTGTGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIIAALYCLFFAYVGAAGLSFLQFCNLNSFKTKFVLGFSIFMGLSIPQYFNEYRVVNGYGPVHTGARWFNDMINVPFSSEAFVAGLLALFLDSTLHRKDNTTRKDRGMIWWEKFRSFKTDSRSEEFYSLPFNLNKFFPSV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0890 483 Pfam Permease family 1 393 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vvi1g0890 483 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 481 - -
Vvi1g0890 483 NCBIfam purine/pyrimidine permease 4 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0890 Vvi-Chr1 9525636 9529314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0890 1 483 Organic Solute Cotransporters AT1G60030 80.331 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0890 - - vvi:100244964 940.643