Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0889 ATGGGGAATTGCCAGGCCATAGATGCAGCTGCGTTGGTCATACAGCATCCTTGCGGCAGGATAGAGAGGTTGTATTGGACGGTGAGTGCGGGAGAGGTGATGAGAATGAACCCGGGACATTATGTTTCTCTTATCATTCCATTGCCCATCCCTCAAGATCATGACACTCCTGATAACAAGACTGTGCGCTTCACCCGTGTTAAGCTTCTCCGCCCCACCGATACTCTTGTTCTTGGTCATGCCTACCGCCTCATCACTTCTCAAGAGGTTATGAAGGTGCTGCGGGCAAAGAAGTATGCGAAGATGAAGAAGAACCAGGTGGAATCAGCAGAGAAGTTACAGGGAATGGCGGAGAGGCAGAGTTCAAGTTGTGAAGAAGATGGAGGAAGGTCTGAAATGGAGAAATCCAATCAGGTGGTGAAGCATGAAAGACACCGACCGAGGACAGCATCAACGACTTCTGCTGCAGCGGCAAGGTCAAAATCATGGCGACCCTCATTGCAGAGCATCTCTGAGGCTGGAAGCTGA 528 0.5057 MGNCQAIDAAALVIQHPCGRIERLYWTVSAGEVMRMNPGHYVSLIIPLPIPQDHDTPDNKTVRFTRVKLLRPTDTLVLGHAYRLITSQEVMKVLRAKKYAKMKKNQVESAEKLQGMAERQSSSCEEDGGRSEMEKSNQVVKHERHRPRTASTTSAAAARSKSWRPSLQSISEAGS* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0889 175 MobiDBLite consensus disorder prediction 111 175 - -
Vvi1g0889 175 MobiDBLite consensus disorder prediction 150 175 - -
Vvi1g0889 175 Pfam PADRE domain 1 172 IPR025322 -
Vvi1g0889 175 MobiDBLite consensus disorder prediction 123 149 - -
Vvi1g0889 175 PANTHER EXPRESSED PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0889 Vvi-Chr1 9518439 9519444 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0889 - - vvi:100250100 338.961