Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0879 ATGGGTATACGCGTGCTTCTTCTCGTGACTATTATGCTCTTCTGCATTGCTGAGGCTTCATCTGATGATAATAACATATTCGAACATCAACATAATCAGGCGGTCAAAGGATCAGCTGGCAGGAGGCTTCTGCCTTTCTTGGACTGTGGAGGGCTGTGCAAGGAGAGGTGCAGTTTGCACTCAAGACCGAACGTTTGCACCAGAGCATGTGGGACGTGCTGTGTTAGGTGCAAATGCGTTCCTCCAGGCACCTATGGAAACAGAGAAATGTGTGGGACTTGCTACACCGAGATGACCACCCACGGCAACAAGCCCAAGTGCCCTTAG 327 0.5046 MGIRVLLLVTIMLFCIAEASSDDNNIFEHQHNQAVKGSAGRRLLPFLDCGGLCKERCSLHSRPNVCTRACGTCCVRCKCVPPGTYGNREMCGTCYTEMTTHGNKPKCP* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0879 108 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 108 - -
Vvi1g0879 108 Pfam Gibberellin regulated protein 48 108 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0879 Vvi-Chr1 9381769 9382394 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0879 - - vvi:100265557 240.736