Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0875 ATGGCTTCCAAGCTTGAAGTAGATGTGGAGGTCAAGTGCAATGCAGAAAAGTATTGGGAAAGCATCAGGGACTCCAACACTATCTTCCCCAAGGCCTTCCCTGACCAGTACAAGTGCATTAAAGTGCTGGAAGGAGACGGGAAGTCTGTAGGATCTGTTCGTCACATAACATATGGCGAAGGGTCTCCACTTGTTAAGGAATCCGAAGAGAGGGTCGACATAGTGGATGAAGCCGACAAGAAGGTTTCTTACAGTGTTATTGGTGGGGATCTCCTCAAGTATTACAAGAATTTCAAGGCCACACTGGTTATCACTCCAAAGGGAGATGGGAGCTTGGTGAAATGGACCTGTGACTTTGAGAAGGCAAGTGCAGAGATTCCTGATCCAAACGTAATAAAAGAATTTGCTGTCAAGAACTTCATAGAGCTGGATGACTATATTCACAAGACAATGCAGGCATAG 462 0.4524 MASKLEVDVEVKCNAEKYWESIRDSNTIFPKAFPDQYKCIKVLEGDGKSVGSVRHITYGEGSPLVKESEERVDIVDEADKKVSYSVIGGDLLKYYKNFKATLVITPKGDGSLVKWTCDFEKASAEIPDPNVIKEFAVKNFIELDDYIHKTMQA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0875 153 PRINTS Major pollen allergen Bet V1 signature 24 34 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vvi1g0875 153 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vvi1g0875 153 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vvi1g0875 153 Gene3D - 1 150 IPR023393 -
Vvi1g0875 153 FunFam Major pollen allergen Bet v 1-A 1 151 - -
Vvi1g0875 153 PANTHER MLP-LIKE PROTEIN 423 1 147 - -
Vvi1g0875 153 SUPERFAMILY Bet v1-like 2 149 - -
Vvi1g0875 153 CDD Bet_v1-like 4 146 - -
Vvi1g0875 153 SMART Bet_v_1_2 1 150 IPR000916 GO:0006952
Vvi1g0875 153 Pfam Pathogenesis-related protein Bet v 1 family 2 149 IPR000916 GO:0006952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0875 - - vvi:100243241 312.768