Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0866 ATGGCAAGTTGGAAAACCACCCTTCTACTTCTTACTCTTTTTCTCCTTTCTCTGTTTCTCGAGCTTCTCCTAGCTCAAGCTACTATTATCAATTCCATTGATGGTGGTATGAACAAGGGCTGCATTGAGGTAGAGCGGAAAGCGCTTCTAGAATTCAAAAATGGACTGAAAGAACCTTCACGTACGCTTTCTTCCTGGGTTGGTGCAGATTGCTGCAAGTGGAAAGGTGTGGATTGCAACAACCAAACAGGGCATGTTGTCAAGGTTGACCTCAAATATGGTGGTTTGGGTGGTGAGATAAGTGATTCCTTACTTGACTTGAAACATTTAAATTACTTGGACCTAAGTTTTAATGATTTTCAAGGAATTCCAATTCCAAATTTCTTGGGCTCATTTGAAAGGTTGAGATACCTTAATCTCTCTCATGCAGCATTTGGTGGAATGATTCCTCCCCATCTTGGAAATTTGTCACAGTTATGTTATCTTGATCTTAGTGGAGATTACTACTCTCGTGCTCCATTAATGAGGGTTCATAATTTGAATTGGCTTTCTGGTCTTTCTTCTTTAAAATACCTTGATCTGGGGAATGTGAACCTTAGTAAAGCAACCACAAATTGGATGCAAGCTGTAAACATGCTTCCATTTTTGTTAGAATTACATTTGTCCCATTGTGAACTCGGTGACTTCCCTCACTCCATTTCGTTTGTTAATTTGACTTCTCTTTTGGTCATTGACCTCTCCCACAACAATCTCAGCACTACCTTTCCTGGCTGGTTGTTTAACATCAGCACCCTCACGGATCTTTATTTAAATGATGCTAGTATTGGAAGTGAAGGAATTGAATTGGTGAATGGTTTATCGACATGCGCTAATAATTCCTTGGAACGGTTACACTTGGGTGGTAATCGATTCGGTGGTCAGTTGCCAGATTCATTAGGGCTCTTTAAGAATTTAAAATCCCTGGACTTGAGCTATAATAGTTTTGTTGGTCCCTTCCCCAATTCAATTCAACACCTTACCAACTTAGAGAGTCTTAATCTGAGGGAAAACTCCATCTCAGGTCCAATTCCAACATGGATTGGAAACTTGCTGCGGATGAAGAGACTTGACTTGTCAAACAATCTAATGAATGGGACGATTCCAAAAAGTATCGGACAACTTAGAGAGCTGACTGTGTTGTATCTTAATTGGAATTCTTGGGAAGGGGTAATGTCTGAAATTCATTTCAGTAATCTTACAAAACTGGAATATTTCTCTTCACACTTATCACCCACAAAGCAGTCTTTCCGTTTTCATGTGAGACCTGAATGGATTCCTCCCTTCAGTCTCATGTCTATCGATATTTCCAACTGCAATGTATCTCTCAAATTCCCTAACTGGATTAGAACTCAAAAAAGACTTCACTTCATAACCCTAAAAAATGTGGGGATTTCAGATACAATACCAGAATGGCTTTGGAAACTATATTTTTTGTGGTTAGATCTTTCTAGAAACCAATTGTATGGAAAGCTTCCCAACTCATTATCCTTTAGCCCAGCATCAGTCCTGGTGGATTTAAGCTTCAACCGCTTGGTGGGCCGATTACCACTTTGGTTTAATGCGACATGGCTCTTTCTCGGAAACAATTCATTTTCAGGTCCAATTCCCTTGAACATCGGGGACTTATCAAGTTTGGAAGTCCTCGATGTTTCTAGTAACTTGTTAAATGGCAGCATTCCTTCATCAATGAGTAAACTAAAGGATTTGCGAGTAATTGATCTCTCAAACAATCAATTATCTGGAAAGATTCCAAAGAATTGGAGTGATTTGCAGCATCTTGACACCATAGACCTATCCAAGAACAAACTGTCTGGTGGGATTCCGAGTTGGATGTGTTCAAAATCTTCACTTACTCAGTTGATATTGGGTGACAACAATCTTACTGGGGAACTCACTCCAAGTTTACAAAACTGCACAGGGCTGTCCTCCCTTGATCTGGGGAATAACAGGTTTTCGGGTGAGATACCCAAATGGATTGGAGAAAGAATGCCATCACTGGAGCAGATGCGTCTACGAGGCAACATGTTGACGGGAGATATTCCTGAGCAATTGTGTTGGCTTTCTCATCTCCACATTTTGGATCTTGCAGTGAACAATTTATCAGGATTCATCCCACAATGCTTAGGCAATTTAACTGCTTTAAGTTTTGTGGCCTTATTAAACAGAAATTTTGACAACCTCGAATCTCATGGCTCCTATTCGGAGAGCATGGAGCTAGTTGTAAAGGGACAAAATATGGAATTTGATAGCATATTGCCAATTTTGAATTTGATAGATCTTTCTAGCAATAACATTTGGGGAGAGATCCCAAAAGAGATCACAAATCTCTCGACCCTGGGTGCCTTGAATTTGTCCCGAAACCAGTTGACTGGAAAGATACCTGAGAAGATTGGAGCCATGCAAGGGCTAGAAACTCTTGACCTCTCATGGAACTGCCTGTCAGGCCCAATTCCTCCGAGCACGTCTTCTATAACCTCATTGAACCATTTGAACCTATCGCATAACCGCCTGTCAGGACCAATTCCAACAACCAACCAGTTCTCGACATTCAATGATCCATCCATTTATGAGGCGAACCCAGGACTTTATGGGCCTCCATTGTCAACCAACTGCTCCACTCTAAATGATCAAGATCACAAAGATGAGGAGGAAGATGAAGGTGAATGGGACATGTCATGGTTCTTCATAAGCATGGGATTGGGCTTTCCGGTGGGATTTTGGGCTGTATGTGGTAGTTTGGCTCTAAAGAAGTCTTGGAGGCAGGCATATTTTCGGTTCATTGATGAAACCAGAGATAGGCTATATGTTTTCACTGCAGTGAATGTGGCTCGTCTTAAAAGGAAGATGGAAACAAATGGAGTTCATCGTTGA 2910 0.4103 MASWKTTLLLLTLFLLSLFLELLLAQATIINSIDGGMNKGCIEVERKALLEFKNGLKEPSRTLSSWVGADCCKWKGVDCNNQTGHVVKVDLKYGGLGGEISDSLLDLKHLNYLDLSFNDFQGIPIPNFLGSFERLRYLNLSHAAFGGMIPPHLGNLSQLCYLDLSGDYYSRAPLMRVHNLNWLSGLSSLKYLDLGNVNLSKATTNWMQAVNMLPFLLELHLSHCELGDFPHSISFVNLTSLLVIDLSHNNLSTTFPGWLFNISTLTDLYLNDASIGSEGIELVNGLSTCANNSLERLHLGGNRFGGQLPDSLGLFKNLKSLDLSYNSFVGPFPNSIQHLTNLESLNLRENSISGPIPTWIGNLLRMKRLDLSNNLMNGTIPKSIGQLRELTVLYLNWNSWEGVMSEIHFSNLTKLEYFSSHLSPTKQSFRFHVRPEWIPPFSLMSIDISNCNVSLKFPNWIRTQKRLHFITLKNVGISDTIPEWLWKLYFLWLDLSRNQLYGKLPNSLSFSPASVLVDLSFNRLVGRLPLWFNATWLFLGNNSFSGPIPLNIGDLSSLEVLDVSSNLLNGSIPSSMSKLKDLRVIDLSNNQLSGKIPKNWSDLQHLDTIDLSKNKLSGGIPSWMCSKSSLTQLILGDNNLTGELTPSLQNCTGLSSLDLGNNRFSGEIPKWIGERMPSLEQMRLRGNMLTGDIPEQLCWLSHLHILDLAVNNLSGFIPQCLGNLTALSFVALLNRNFDNLESHGSYSESMELVVKGQNMEFDSILPILNLIDLSSNNIWGEIPKEITNLSTLGALNLSRNQLTGKIPEKIGAMQGLETLDLSWNCLSGPIPPSTSSITSLNHLNLSHNRLSGPIPTTNQFSTFNDPSIYEANPGLYGPPLSTNCSTLNDQDHKDEEEDEGEWDMSWFFISMGLGFPVGFWAVCGSLALKKSWRQAYFRFIDETRDRLYVFTAVNVARLKRKMETNGVHR* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0866 969 PRINTS Leucine-rich repeat signature 837 850 - -
Vvi1g0866 969 PRINTS Leucine-rich repeat signature 582 595 - -
Vvi1g0866 969 SUPERFAMILY L domain-like 533 868 - -
Vvi1g0866 969 SMART LRR_typ_2 107 131 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 700 723 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 813 837 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 603 627 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 213 236 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 238 262 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 339 363 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 555 579 IPR003591 -
Vvi1g0866 969 SMART LRR_typ_2 765 789 IPR003591 -
Vvi1g0866 969 PANTHER LRR RECEPTOR-LIKE KINASE 291 374 - -
Vvi1g0866 969 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 759 884 - -
Vvi1g0866 969 Pfam Leucine Rich Repeat 317 339 IPR001611 GO:0005515
Vvi1g0866 969 SMART LRR_sd22_2 721 742 - -
Vvi1g0866 969 SMART LRR_sd22_2 315 344 - -
Vvi1g0866 969 SMART LRR_sd22_2 579 605 - -
Vvi1g0866 969 SMART LRR_sd22_2 813 842 - -
Vvi1g0866 969 SMART LRR_sd22_2 555 578 - -
Vvi1g0866 969 SUPERFAMILY L domain-like 69 418 - -
Vvi1g0866 969 Gene3D Ribonuclease Inhibitor 279 436 IPR032675 -
Vvi1g0866 969 Gene3D Ribonuclease Inhibitor 437 534 IPR032675 -
Vvi1g0866 969 Gene3D Ribonuclease Inhibitor 41 211 IPR032675 -
Vvi1g0866 969 FunFam Leucine-rich repeat receptor-like kinase 44 157 - -
Vvi1g0866 969 Pfam Leucine rich repeat N-terminal domain 45 80 IPR013210 -
Vvi1g0866 969 SUPERFAMILY L domain-like 435 567 - -
Vvi1g0866 969 Gene3D Ribonuclease Inhibitor 535 893 IPR032675 -
Vvi1g0866 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 279 533 - -
Vvi1g0866 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 534 755 - -
Vvi1g0866 969 Pfam Leucine rich repeat 535 592 IPR001611 GO:0005515
Vvi1g0866 969 Pfam Leucine rich repeat 340 398 IPR001611 GO:0005515
Vvi1g0866 969 Pfam Leucine rich repeat 792 850 IPR001611 GO:0005515
Vvi1g0866 969 Gene3D Ribonuclease Inhibitor 212 278 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0866 Vvi-Chr1 9212767 9215676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0866 41 940 Receptor kinase-like Gene Family AT4G13920 31.263 5.46e-94 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0866 - - vvi:100260433 1911.73