Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0864 ATGGACTGGTTTCATGGTGGTCTGCAGTTTCAGCTTGAGCACCATTTGTTTCCTCAGTTGCCAAGGTGCCATTTGAGGAGCATTTCCCCTTTGGTGAAGGACCTATGCAAGAAGCATAATTTGCCTTATAGGAGTTTATCGTTTTGGGAGGCCAACATGTCGACAATTAGGACGCTAAGAACTGCTGCTCTGCAGGCTCGTGACCTTACCAACCCTGATCTGCCAATTTGGTTGGGAAGCTGCTAA 246 0.4756 MDWFHGGLQFQLEHHLFPQLPRCHLRSISPLVKDLCKKHNLPYRSLSFWEANMSTIRTLRTAALQARDLTNPDLPIWLGSC* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0864 81 Pfam Fatty acid desaturase 2 46 IPR005804 GO:0006629
Vvi1g0864 81 PANTHER FATTY ACID DESATURASE 2 1 68 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0864 Vvi-Chr1 9187495 9187740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0864 1 74 Lipid Metabolism Gene Families AT2G46210 81.081 2.51e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0864 K21734 K21737 vvi:100265385 152.525