Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0863 ATGTACAATTTGGGGCATGCGGGGTTGACGTTTTGGAGTCCAAACATCAATGTAGTACGTGATACAAGATGGGGAAGGACCCAAGAGACATCCCGTGAAGATCCTTTCATGGTTGGTGAGTTTGCAGTTAACTACGTTAGAGGCCTGCAGGATGTTGAGGGAACAGAGAACGTTACGGATTTGAACTCTAGGCCTCTCAAGGTCTCCTCATGCTGCAAGCATTATGCTGCTTATGATATTGATTCATGGCTTAACATCGATCGACATACTTTCGATGCAAGGGTTTCTGAGCAAGATATGAAGGAGACTTTTGTCTCTCCATTTGAGAGGTGCGTCAGAGAGGGTGATGTAAGCAGTGTTATGTGCTCCTTTAATAAAATCAACGGAATCCCTCCTTGTTCTGATCCAAGACTCTTGAAAGGAGTGATAAGAGACGAATGGGATCTTCACGGCTACGGATCCAACAACTTAAAATGA 477 0.4444 MYNLGHAGLTFWSPNINVVRDTRWGRTQETSREDPFMVGEFAVNYVRGLQDVEGTENVTDLNSRPLKVSSCCKHYAAYDIDSWLNIDRHTFDARVSEQDMKETFVSPFERCVREGDVSSVMCSFNKINGIPPCSDPRLLKGVIRDEWDLHGYGSNNLK* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0863 158 Pfam Glycosyl hydrolase family 3 N terminal domain 11 151 IPR001764 GO:0004553|GO:0005975
Vvi1g0863 158 SUPERFAMILY (Trans)glycosidases 9 152 IPR017853 -
Vvi1g0863 158 Gene3D - 3 153 IPR036962 GO:0004553|GO:0005975
Vvi1g0863 158 PRINTS Glycosyl hydrolase family 3 signature 142 158 IPR001764 GO:0004553|GO:0005975
Vvi1g0863 158 PRINTS Glycosyl hydrolase family 3 signature 68 84 IPR001764 GO:0004553|GO:0005975
Vvi1g0863 158 PRINTS Glycosyl hydrolase family 3 signature 23 39 IPR001764 GO:0004553|GO:0005975
Vvi1g0863 158 PANTHER SUGAR HYDROLASE-RELATED 1 152 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0863 Vvi-Chr1 9186135 9186690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0863 1 152 Glycoside Hydrolase AT3G19620 62.500 5.31e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0863 K15920 - vvi:100253564 325.479