Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0861 ATGTACCCCTATTTAAACCATCTCAGCTCTAAATTGTGCCGAGGTATCCTGGAGTTGGCAGAGGGACGCCTTCTCGGGAAGTCAGGCTTACATTGGCTGAAGATACATTTAGAAAATGTATATGCTAGTGGAATGGACAAGTTATCGTATGAGGGTTGGGTAGCATTTACTGAGAATCATTTGGAAGATATCTTTGATTCCGCAGACAGACCTCTAGAAGGAAGACGCCGATGGTTGTCTGCCTAG 246 0.4472 MYPYLNHLSSKLCRGILELAEGRLLGKSGLHWLKIHLENVYASGMDKLSYEGWVAFTENHLEDIFDSADRPLEGRRRWLSA* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0861 81 Pfam DNA-dependent RNA polymerase 25 81 IPR046950 -
Vvi1g0861 81 SUPERFAMILY DNA/RNA polymerases 2 81 IPR043502 -
Vvi1g0861 81 PANTHER DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL 1 81 IPR002092 GO:0003677|GO:0003899|GO:0006351
Vvi1g0861 81 Gene3D - 23 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0861 Vvi-Chr1 9173011 9173256 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0861 K10908 - vvi:100263361 145.591