Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0856 ATGATTCCTGAAGGAATCACCGTGTCTGATGCATGCCGAATGATGTCAGCTCGGAAAGTGGATGTTGTTTTGTTGACAGATTCAAATGCGATTCTCTCTGGAATTGTTATAGACAAGGATATCGCCACTAGAGTTATAGTGGAAGAACTGAGGCCAGAACAGACGGCAGTTTCAAAGATTATGACAAGGCATCCAATTTTGGTCAACTCAGATTCGTTGGCTATTGAGGCTCTTGAAAAAATGGTGCAAGGCAAGTTTAGGCACCTTCCTATAGCAGAAAATGGTGAAGTTATTGCTTTATTGGATTTTACAAAGTGCCTTTATGATGCTATATCCCGAATGGAGAAGGTTGCGGAGCATGGTAGTGCAATCGTGGCTACTGTTGAAGGGGCAGAACGCCAATGGGAAAGCAATTTCTCTGCTCCGTATAGTTTTATCGAAATGCTCAGGGAGTGGATGTTCAAGCTTGCTTTGTCAACTATCATTTCGGAAAATACCAAGGTGGCAATAGTATCACCCTCAGATCCTATCTCTGTTGCTGCTACAAAGATGCGAGAATATCGGGTTAATTCAGTTATCAGCATGACTGGAATCCAGATTCAGGGGATATTAACTTCAAAGGGTATTCTTATGCGGGTATCACCTGTTCCGAAATAA 657 0.4231 MIPEGITVSDACRMMSARKVDVVLLTDSNAILSGIVIDKDIATRVIVEELRPEQTAVSKIMTRHPILVNSDSLAIEALEKMVQGKFRHLPIAENGEVIALLDFTKCLYDAISRMEKVAEHGSAIVATVEGAERQWESNFSAPYSFIEMLREWMFKLALSTIISENTKVAIVSPSDPISVAATKMREYRVNSVISMTGIQIQGILTSKGILMRVSPVPK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0856 218 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 2 211 - -
Vvi1g0856 218 Pfam CBS domain 2 43 IPR000644 -
Vvi1g0856 218 Pfam CBS domain 57 101 IPR000644 -
Vvi1g0856 218 Pfam CBS domain 165 211 IPR000644 -
Vvi1g0856 218 SUPERFAMILY CBS-domain pair 2 105 IPR046342 -
Vvi1g0856 218 Gene3D - 1 127 IPR046342 -
Vvi1g0856 218 Gene3D - 167 216 - -
Vvi1g0856 218 ProSiteProfiles CBS domain profile. 1 53 IPR000644 -
Vvi1g0856 218 SMART cbs_1 167 214 IPR000644 -
Vvi1g0856 218 SMART cbs_1 1 46 IPR000644 -
Vvi1g0856 218 SMART cbs_1 64 108 IPR000644 -
Vvi1g0856 218 SUPERFAMILY CBS-domain pair 142 213 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0856 Vvi-Chr1 9159672 9161483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0856 - - vvi:100264560 351.288