Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0852 ATGGGTAAGAGTGTTTTGGTGTTGGTTCTCACTCTCGTGGTTTTGTCTGGCGGGGTCTCATCAGCTTCGGCTACTGCTTCTCCTGCAAAGATTGTTACTGGGTTTGTCTCAGATGCTGTTCCTGTTGTGATGAAATGGCTCTGGTCTCTTAAAGCTACCACCAAAACAGCGATTTCTAGCCGGTCGATGATGAAGTTTGAGAGTGGGTACACAGTTGAGACCGTGTTTGATGGAAGCAAGCTTGGAATTGAACCCTACTCAATTGAGGTTTTGGGCAGTGGGGAACTTCTGATTCTGGATTCTGCTAACAGTAACCTGTACAAGATCTCTTCCTCACTGTCTCAATATACCAGACCAAAGCTGGTCACTGGATCCGCTGAAGGATACTCTGGACATGTAGATGGGAGGCTCAGAGAGGCAAGGATGAATCATCCGAAGGGGCTTACTGTGGATGACAGAGGAAACATTTATGTTGCAGATACCTTGAATATGGCCATCAGGAAGATAAGTGATGCAGGGGTTACAACAATTGCAGGGGGGAAGCTGGGCCGTGGAGGGGGGCATGTAGATGGGCCAAGTGAAGATGCAAAGTTTTCTAATGATTTTGATGTGGTGTACATTGGCAGCAGTTGCTCCCTACTTGTCATAGACAGAGGAAACCAGGCAATTCGGGAGATCCAACTTCATTTTGATGACTGTGCTTATCAATATGGAAGTGGTTTCCCTCTAGGGATTGCAGTGCTTATTGCTGCTGGGTTTTTTGGTTACATGCTGGCACTTCTGCAACGTAGAGTGGGCACAATTGTGTCCTCTGAAAATGATCAGGCAAATCCAAGTATTGCCCATAGTACATATCAAAAGCCTCTGAAATCAGTCAGGCCACCGCTAATCCCTACTGAAGATGAGATGGAAAGGCAAGAAGAAGGCTTCTTTGGGTCCCTTGGGAAGCTTTTTGTCTATGCTGGGGCATGTATTGCAGAAATCTTTGGAGGAATGATTCCAGGATTGAAGAAGAAGCCACACAGCTATCAATACCAAAACCAACAAAATTACCAGCAACCACAAAAACATTCTAATGCTTGGCCATTGCAAGAGAGCTTTGTGATACCTGATGAGGATGAGCCCCCCTCTATTGATACTAGGACCCCTACTCCGCGAAAAACCTATCCATTCATGTCCAAGGATGCAGAAAAGATGCATCAAATCAGACAAAGCCGTGCTTTTGTAAGTGGGTGGGATGGTGATTTCCAGCAACAGCAGAAACAACATCATCATCGCCATTATTCTTCCACCCCGCATACTTATTACGAGCAGAACTGTGAGAAAACCAATGAGATTGTCTTTGGGGCTGTTCAGGAGCAGCAAGTCCGGCGTGAACCTGTGGATATAAAGCCTGTGAACTATGGAGATCCCATCTATGATCATCACAATATTCGCTCTCGTATCCATTCAAAGGGTTACACCCAGGGCTATTGA 1476 0.4587 MGKSVLVLVLTLVVLSGGVSSASATASPAKIVTGFVSDAVPVVMKWLWSLKATTKTAISSRSMMKFESGYTVETVFDGSKLGIEPYSIEVLGSGELLILDSANSNLYKISSSLSQYTRPKLVTGSAEGYSGHVDGRLREARMNHPKGLTVDDRGNIYVADTLNMAIRKISDAGVTTIAGGKLGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNQAIREIQLHFDDCAYQYGSGFPLGIAVLIAAGFFGYMLALLQRRVGTIVSSENDQANPSIAHSTYQKPLKSVRPPLIPTEDEMERQEEGFFGSLGKLFVYAGACIAEIFGGMIPGLKKKPHSYQYQNQQNYQQPQKHSNAWPLQESFVIPDEDEPPSIDTRTPTPRKTYPFMSKDAEKMHQIRQSRAFVSGWDGDFQQQQKQHHHRHYSSTPHTYYEQNCEKTNEIVFGAVQEQQVRREPVDIKPVNYGDPIYDHHNIRSRIHSKGYTQGY* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0852 491 Gene3D - 37 227 IPR011042 -
Vvi1g0852 491 PANTHER - 29 491 - -
Vvi1g0852 491 MobiDBLite consensus disorder prediction 368 389 - -
Vvi1g0852 491 Pfam NHL repeat 143 168 IPR001258 GO:0005515
Vvi1g0852 491 SUPERFAMILY Calcium-dependent phosphotriesterase 45 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0852 Vvi-Chr1 9035382 9038904 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0852 - - vvi:100263777 940.258