Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0835 ATGGGCATCTCCGGCGAAGATACCGAATCTTCCCGCCTCCTCACCACTACCTCCACTGGATCTCCTTGCAAGATTCCTAAAGATTCTTACCACTTTGCCTACATCATCTACTTTACCCTGGGCGCCGGTTTCCTCCTTCCCTGGAACGCCTTCATCACCGCCGTCGATTACTTCTCCTACCTCTATCCAGATGTCAGCGTCGATCGCATCTTCGCCGTCGTTTACATGGTGGTCGCTCTCTTCTGCCTCCTCCTTATTATCGCCTACACCCACAAGTCAGACGCCTTCGTCCGCATCAACATCGGCATGGCCATCTTCATCGTCGGTCTTCTCGTGGTTCCGATAATGGATGTTGTGTACATAAAGGGCCAGACAGGGCTCTATTCGGGCTTTTATGTGACTGTTGCGGCCGTTGGACTTTCGGGTTTGGGCGATGCATTGGTACAGGGCGGGGTCATCGGGTCCGCCGGTGAGATGCCGGAGCGGTACATGCAAGCCGTCGTCGCCGGAACTGCAGCCTCCGGGGTGCTTGTTTCATTTCTAAGGATCTTCACCAAGGCTGTGTTTTCACAAGATACCCAGGGCCTGAGAAGAAGTGCAATCCTGTATTTTTCAGTGAGTATTGTCGTTATGGCAGTATGCATTGTCTTTTACAATGTGGCGCACAGGCTTCCAGTTATTAAGTACTATAGAAATCTAAAGGCACAGGCAGTTAATGAGGAGAAAGAAGAGAAAGGTTCCTTGACAGCAGCTGTATGGGGAGCAACCTTATGGGATATATTAGGGAGAGTCAAGTGGTATGGGTTTGGCATCCTCCTCATCTATGTTGTCACTTTGTCAATATTTCCAGGATATATCACAGAGGATGTGCATTCCAAGGTCCTCAAGGACTGGTACCCAATCCTCCTCATTGCTGGCTACAATGTGTTTGACTTGGTTGGCAAGTCTCTAACAGCAGTATACCTCCTTGAGAATGCAAAGATTGCAATTAGCGCTTGCATTGCAAGATTATTGTTTTATCCTCTCTTCTTAGTTTGCTTGCATGGCCCCGAATTCTTCCGAACAGAGATTCCGGTGACAGTACTGACTTGTCTTCTGGGACTTACCAATGGCTACTTAACGAGTGTGTTGATGATTTTGGCTCCTAAAGCTGTCCAATTACAGCATGCTGAGACTGCAGGCATTGTGATTGTACTGTTCTTAGTTGTTGGCCTTGCTATTGGTTCAATTGTTGCTTGGTTCTGGGTCATATGA 1254 0.4833 MGISGEDTESSRLLTTTSTGSPCKIPKDSYHFAYIIYFTLGAGFLLPWNAFITAVDYFSYLYPDVSVDRIFAVVYMVVALFCLLLIIAYTHKSDAFVRINIGMAIFIVGLLVVPIMDVVYIKGQTGLYSGFYVTVAAVGLSGLGDALVQGGVIGSAGEMPERYMQAVVAGTAASGVLVSFLRIFTKAVFSQDTQGLRRSAILYFSVSIVVMAVCIVFYNVAHRLPVIKYYRNLKAQAVNEEKEEKGSLTAAVWGATLWDILGRVKWYGFGILLIYVVTLSIFPGYITEDVHSKVLKDWYPILLIAGYNVFDLVGKSLTAVYLLENAKIAISACIARLLFYPLFLVCLHGPEFFRTEIPVTVLTCLLGLTNGYLTSVLMILAPKAVQLQHAETAGIVIVLFLVVGLAIGSIVAWFWVI* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0835 417 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 22 415 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vvi1g0835 417 MobiDBLite consensus disorder prediction 1 20 - -
Vvi1g0835 417 PIRSF ENT 6 417 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vvi1g0835 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 136 156 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vvi1g0835 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 356 372 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vvi1g0835 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 393 417 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vvi1g0835 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 375 391 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vvi1g0835 417 Pfam Nucleoside transporter 136 416 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0835 Vvi-Chr1 8807379 8810190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0835 4 417 Organic Solute Cotransporters AT1G70330 71.154 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0835 K15014 - vvi:100250206 812.372