Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0829 ATGATTGATTTGGTTAGGTATCTGCAGCAGCCAGTGTCTCCAACAGATAGGGCACCGTGTAATTATCATTTTTTCAATACATATTTCTACAAGAAGCTTAAAGAGGCTTTATCATACAAGGGGAGTGACAAGGAAACTTCTTTTATTAAGTTTAGAAGGTGGTGGAAGGGTGTAAATATATTTCAGAAGGCATATATTCTTCTTCCAATACATCAAGATCATCATTGGAGCTTGGTGATCATTTGTATCCCAGACAAGGAAGATGAAGCAGGGCCGATCATACTTCATTTGGATTCATTGGGTTTGCACTATAGTAGACCAATTTTTGATGATATTAAAAGCTACTTGAAAGAAGAATGGAAGTATCTGAATCAAGAAGCAGATTCTGCTGATCTTCCTATTGCTGACAGAATATGGAAACATCTCCCTCGCAGGATTGAGGAGAAAGTAATTGCGGTTCCCCAACAAAAGAATGACTATGATTGTGGTCTCTTTGTACTTTTCTTCATGGAGCGGTTCATTGAAGAGGCCCCTGAAAGGCTGAAAAAGAAGGATTTAGCAATGTTTGGAAAGCAGTGGTTCAAACCTGAAGAAGCATCTGGTTTGAGAGTGAAAATCCGAAATTTACTGATGAAAGAATTGCAGAATGCAAGTGAGAATAACTAA 666 0.3814 MIDLVRYLQQPVSPTDRAPCNYHFFNTYFYKKLKEALSYKGSDKETSFIKFRRWWKGVNIFQKAYILLPIHQDHHWSLVIICIPDKEDEAGPIILHLDSLGLHYSRPIFDDIKSYLKEEWKYLNQEADSADLPIADRIWKHLPRRIEEKVIAVPQQKNDYDCGLFVLFFMERFIEEAPERLKKKDLAMFGKQWFKPEEASGLRVKIRNLLMKELQNASENN* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0829 221 ProSiteProfiles Ubiquitin-like protease family profile. 1 173 IPR003653 GO:0006508|GO:0008234
Vvi1g0829 221 Pfam Ulp1 protease family, C-terminal catalytic domain 4 198 IPR003653 GO:0006508|GO:0008234
Vvi1g0829 221 Gene3D - 22 150 - -
Vvi1g0829 221 SUPERFAMILY Cysteine proteinases 18 212 IPR038765 -
Vvi1g0829 221 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 5 220 - -
Vvi1g0829 221 Gene3D - 5 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0829 Vvi-Chr1 8712472 8728580 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0829 K16287 - vvi:100241600 462.996