Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0823 ATGGCATCGTTGGCGCCAGGAATTTTGTTGAAGCTTCTCAATGGCATGAATTCTGGGCTTAAACCCACCAGCGAACACCGGAGCTCACTTCTGCAGGTGACGGACATCGTCCCTGCCGATCTTGATGAGAAGAATCTCTGGCCTAAGCACGGATTCTACATCAAAGTCTCCGATTCTTCGCACTCCATTTACGTCAGTCTTCCATTTGAACAGGATGATCTTGTTCTCAGTAACAAAATGCAGCTTGGCCAATTCATCTATGTTGATAGATTGGAGCCGGGATCTCCGGTCCCCGTAGTTAAGGGCGCGAAACCACTTCCGGGAAGACACCCATTAGTGGGCACACCAGAACCGATAATGGGCCTGAGAGAAAAGGGTGAGAAAGCTGATCAGAAGGCCAATTCCAAACCCTCAGGTCACAGGAGGGGTTCCTGGGGAACGCCTCAGAATGGAGGGGATGCCGTGTCATCTCCCATGGCTTTGAAGCCAATTCCTTTGGACTTTGATCAGTGTACACCAGTTAAAGAGCGGCCCACGCTTCCCATGTCTCCAATGATAAGGTCGAGAGTGGGGAAGGATGGAAACCCGAGCTCGGCCGCCAGGTGTTCGATCAGTGGTGGGCAATTTGCCAAAATGTTGGATTCCAAAGGAGAAAGTCCTGCTATACTGAGGAAAAGCTGTGTTGCCCATTCTGCATCCAAGTTCCCAAGGAGCAAGAGCGTCTGCGACAGAGAGCCAAGAATCCCAAGGAGTCCCTTCAACTCAGCTGAGAAAAAGAGTACAACACCCCCACCAAGTTTACGGAACCCAAGATTAGCAGATTCATTCAGTATGGCCGGGAATGCACAGAATTCTTCAGACTCAAGGATGATGACTTTACAACAACAGTCTCAGCCTGTTAATTCAGTTTCCAATAATAACAGCAGTCTACCTATGGTTTTACCAGGAAAACTTGCCGTACTGGGCAAGGAAGCAGCACAGCAACGAGAAACAGCACAGAAAATTGCCCTTCAAGCACTCAGAGATGCTTCAGCTACTGAAACTCTAGTTCGGTCTCTCAAGATGTTGTCAAACTTGAGTAAATCAGCTAAGGCAGATGCTCCAGCTGCCTGTTTTGACCAGTTTCTGGATTTCCATCTTCAAATTGTGCAAGCAGTGACTGATATGGTGTCCATACAAGCAGCTACTGAAATGGCTCAAACCCCAAATGCTGAAGGGAAAGGAGCTTTTGGAAAACAGCATGAAGAAGATTCACCCATCTTACATGAAATTATGCACAACTCCATGGACCAAAACCGGAACTCCTTAAATTTGTCCAAGAGAAGATCAGTGTTATACAAGTCAATTGCAGTTATTCCTGAAAGAAGTGATCAGAAGACAAGCCTGGGGAAGCACTTGAGATTGATTCCCAATCCGAAGGCAGCTTTGGAAAGAAAAGGAGGGACCACTCCACTTGGAAAACTGCCCTTTGAAGCTGCTGAGAATGATGAGAACATAAAACCAGCCTCTTGTATCTTGAGCAATACAATCAAATTGGGTAAGCAGGTTGAAACAGAAGCTGGAAACTGGTTTATGGACTTCCTGGAAAAAGCTTTAGAAACAGGTCTGAAGAAACAAAAGGGGACAGCAGTTGGGGATGCTCGGAAAGTTCCTCAGTCTCTCATACTCAAGGTCATTAATTGGGTGGAGGTAGAGCAGTGTGATAGTAGTAAGCGGCCAGTGCATCCCAGAGCAGCACAGATAGCAAGGAAGTTGAGGATCAAGATGAAGAACCCTTGA 1779 0.4699 MASLAPGILLKLLNGMNSGLKPTSEHRSSLLQVTDIVPADLDEKNLWPKHGFYIKVSDSSHSIYVSLPFEQDDLVLSNKMQLGQFIYVDRLEPGSPVPVVKGAKPLPGRHPLVGTPEPIMGLREKGEKADQKANSKPSGHRRGSWGTPQNGGDAVSSPMALKPIPLDFDQCTPVKERPTLPMSPMIRSRVGKDGNPSSAARCSISGGQFAKMLDSKGESPAILRKSCVAHSASKFPRSKSVCDREPRIPRSPFNSAEKKSTTPPPSLRNPRLADSFSMAGNAQNSSDSRMMTLQQQSQPVNSVSNNNSSLPMVLPGKLAVLGKEAAQQRETAQKIALQALRDASATETLVRSLKMLSNLSKSAKADAPAACFDQFLDFHLQIVQAVTDMVSIQAATEMAQTPNAEGKGAFGKQHEEDSPILHEIMHNSMDQNRNSLNLSKRRSVLYKSIAVIPERSDQKTSLGKHLRLIPNPKAALERKGGTTPLGKLPFEAAENDENIKPASCILSNTIKLGKQVETEAGNWFMDFLEKALETGLKKQKGTAVGDARKVPQSLILKVINWVEVEQCDSSKRPVHPRAAQIARKLRIKMKNP* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0823 592 Pfam Plant protein of unknown function (DUF936) 221 554 IPR010341 -
Vvi1g0823 592 Pfam Plant protein of unknown function (DUF936) 4 304 IPR010341 -
Vvi1g0823 592 MobiDBLite consensus disorder prediction 177 199 - -
Vvi1g0823 592 MobiDBLite consensus disorder prediction 276 306 - -
Vvi1g0823 592 MobiDBLite consensus disorder prediction 138 154 - -
Vvi1g0823 592 PANTHER EXPRESSED PROTEIN 1 580 IPR010341 -
Vvi1g0823 592 MobiDBLite consensus disorder prediction 254 268 - -
Vvi1g0823 592 MobiDBLite consensus disorder prediction 237 252 - -
Vvi1g0823 592 MobiDBLite consensus disorder prediction 234 306 - -
Vvi1g0823 592 MobiDBLite consensus disorder prediction 124 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0823 Vvi-Chr1 8666041 8668201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0823 - - vvi:100260333 1152.12