Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0817 ATGTTCACAAAAGATCTCCTTTCCAAGCTTGCTTCTCTAATTAATCCTACCCCACAGGCACCCAAGTGGAAGTCACTTGATGTGCTGGATCAAGCCACCGCTCATGTGAAGCAATTGGAACAAAGGGTAGAGATGCTGGAGAAAAGGAAGCAACAACTTGAAGGCAGCACTGATGAGACTGCAGGCATGAGGGGCTCGATGTCAACTGTTTTCACAGTGACAGAATTGGATTCTGCGATAGAGGTATGTTTGATTAGCAGGTCAAATGACAAGTTCATCCTGACCCGGGTTCTAGATGTTCTTGAGGAGGAAGCAGCTCCTGTTGTAGCTGTTAGCTACTCCCGTGTTGGCGATAAGATCCACTATATAATTAATTCACAGGCGGTTTGTTCTAGAATCGGCATAGACTCTTCAAGGGTGCATGAAAGATTGAAGAGGCTGACTGCAGGGCCATGA 456 0.4627 MFTKDLLSKLASLINPTPQAPKWKSLDVLDQATAHVKQLEQRVEMLEKRKQQLEGSTDETAGMRGSMSTVFTVTELDSAIEVCLISRSNDKFILTRVLDVLEEEAAPVVAVSYSRVGDKIHYIINSQAVCSRIGIDSSRVHERLKRLTAGP* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0817 151 Coils Coil 29 56 - -
Vvi1g0817 151 Gene3D - 3 64 IPR036638 GO:0046983
Vvi1g0817 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 59 IPR036638 GO:0046983
Vvi1g0817 151 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 4 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0817 Vvi-Chr1 8344693 8345316 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0817 - - vvi:100263706 277.715